Gene Dret_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0456 
Symbol 
ID8418262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp559401 
End bp559958 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID645037018 
Productprotein of unknown function DUF208 
Protein accessionYP_003197331 
Protein GI258404589 
COG category[S] Function unknown 
COG ID[COG1636] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.824375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTAC CTAGACGCCT TCTTCTGCAT ATCTGCTGCG GCCCGTGCGC CATCGTTCCC 
CTGCGCCGTC TGACTGAACA GGGGATCGAG GTCACGGGCC TATTCTCCAA CCCCAATATC
CACCCGCTTC AAGAGTATCT GCGCCGGCGC GACGGGGCCT TGGAGGTCGC GGAGCGGTTT
TCCGTCAAGC TCATCTGCAA GGATGCCGAC TACGACCCCG CCGAGTTTTT GCGGCGGGTG
GTCTTCCGCG AAGCGCACCG CTGTTTTCTC TGCTACCAGA CGCGGCTGGA GCGAACCGCC
TCCATCGCCC GCAAGGGGAG CTTCGACGCC TTCAGCTCCA CCCTGCTCTA CAGTAAGCGG
CAAAATCATG CCGCGCTGGC CGAACTCGGG CACCAGATTG CCGGCAATGG CGCCTGCCGG
TTCTGGTACG AGGATTTCCG CACCGGCTGG CGTGAAGGGA TTCAGACGAG TCAGGAGTGG
GGAATTTACC GGCAATCGTA TTGCGGCTGT CTCTACAGCG AATTCGAGCG CTTCCAGAAC
GAACTCCAGT CCGGCTGA
 
Protein sequence
MPLPRRLLLH ICCGPCAIVP LRRLTEQGIE VTGLFSNPNI HPLQEYLRRR DGALEVAERF 
SVKLICKDAD YDPAEFLRRV VFREAHRCFL CYQTRLERTA SIARKGSFDA FSSTLLYSKR
QNHAALAELG HQIAGNGACR FWYEDFRTGW REGIQTSQEW GIYRQSYCGC LYSEFERFQN
ELQSG