| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0454 |
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| Symbol | |
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| ID | 8418260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 555340 |
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| End bp | 558033 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037016 |
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| Product | cytochrome c family protein |
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| Protein accession | YP_003197329 |
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| Protein GI | 258404587 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.523502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATC CGGTTTGGGA ACTCTTTGCG GCTGGCGGCG GCTTGCCGAT CGCGCTGATG
GCCATCGTCC ATGTCTTTGT AGCCCACTTC GCTGTTGGCG GCGGACTTTT CCTCGTCTTG
ACCGAGCGCA AGGCGTATCG GGAAAACTCG AAGTCCATCC TGGAATACAC ACGCAAGCAC
GCCAAGTTTT TTCTGCTTTT GACCATGGTC TTCGGGGGCC TGACCGGCGT CGGGATCTGG
TTTACCATCT CGGTGCTCAG TCCGGGCGCG ACCTCGGTCC TGATCCACAA CTTTTTGTAT
GGCTGGGCCA CGGAATGGGT CTTTTTTGTT GTCGAAATCG TGGCCCTGTT CGTTTATTTC
TACACCTTCG GCAAAATGGA CCAGCAACGC CACCTCACCG TGGGCTGGAT CTATTTCGGC
GCCGCCTGGG CTTCCCTGTT TCTGATCAAC GGCATCATCG CCTTTATGCT GACGCCGGGC
GAGTGGTTGC AAACCGGCAA TTTCTGGCAC GGCTTCTTCA ATCCCACCTT CTGGTCGTCG
CTCGTCTTCC GGACCTTCAT GGCCATTGTC CTGGCTGGCG TCTTTGGATT TGTGACCGCC
ACGTTCATGA AAGATCAGCA GGCACGGGCG CAATTGATCC GTTACAACGC ACGGTGGCTC
CTGGTGCCGA TGGTCTTTCT GGTCGCCTCC GGCTGGTGGT ATCTGCAATC GGTTCCGGAG
CCGGCCCGGG AACTCATTCT TGACCGTTCT CCGGAGCTCG TGCCGTATTT CAAAGCCTTT
CTCTGGCTTT CTGGGGCCGT GTTTCTCGGC GGCCTGCTCC TGACCGCCCG GGGGGGACGG
AGGTGGCAAC GCCCGCTGGC CTTTGTGCTC ATGGCCCTGG CCCTCGGATA TATGGGCAGT
TTTGAATATA TCCGTGAAGC CGGGCGCCAC CCGTATCTGA TTTACGACTA CATGTACTCC
AACGGGATAT TGACCTCCCA GGAAGAGCGC ATCAACGCCC AAGGCTTTCT CGCCAGCGCC
AAATGGACCA GTTTCGATAC GGTCACCCCG GACAACCGCC AGGCCGCGGG CCGGGAAATA
TTCCGCTTGC AATGCATGAA TTGCCATTCT GTGGACGGTC CGCAGAACGA TATTCTGCCG
CTGACCGCCA AATATGATCT GTTCGCCATG GACGCCCAAC TCGACGGGCT TGGTAAACTC
AACGACTACA TGCCCCGGTT TATGGGCACG CGACAGGAAC GCAAGGCCCT TGCCGCCTAC
ATCGTCTCTG ATCTTCACGG CAAGAAACCG GCCGAACCGC ACGAAGCCGG AGCCATTGCG
CAACGGCAGC ATGCTGTGCC CCCGTTTGAC CCCGATTCAG ACGACTATGT CCTTTTGGCC
TGGAATAACC TGGGCATGCA CTGCATCTCC GACAGTTCCG ACTGGTGGGT GCTGCTGCCT
CCGGCCAACG ATCTCTTTGC TCAGCTGATC CGGCGGGGAC CGATCCCCGA GGTCGTCACC
AAAGGTGTGG AGATCGAATA CGCCGTGGAA GAGGGATTTG AAAACCCTGC CGGCAAGGTC
CCGTTTTGGG ACAATGTCGA GGCCCTTTTC GGTACCGAAC TGGAAGACAA TGTCGGCCTG
TCCGGAAACG GCATGCGCGG CAAGATGCAT CTGAGCAAAG AGCTGTCCGC TTTTGAGGCC
TCTCTGGTGC CGGTTGTCCC CTATCCTGAA GAGGGCGGAT ATATGCCGTA TCCGCTGTTC
CATGTCACGG CCAAGGATGC CCAGAGTGGC GAGGTCCTGG CCCGGACCTC GATGGTCGCG
CCAACGAGTA CGGAAATGGG CTGCAAAAAT TGTCACGGCG GTTCCTGGCG GGTGGACGGC
AAGGCCGGCT TCACTGATGC GACCTCCATG GACATCCTGG CGACCCACGA CAAGAATAAC
CGCACCGATC TTCTTGCTGC CGCCCGCAAC GGCGAGCCGA AACTCTGTCA GAGCTGTCAT
CCCGATCCGG TGCTGGGAAC CGAGGAGAAC CCGGACTACC CCAATATCAT GAACTTCCCC
GCCGCGATCC ACGGCTGGCA CGCCAATTAC CTGACTGACC GCGGGGCCGA GGTGTGCAGT
TCCTGCCATC CGTCGTCCGC CGCAGGGCCG ACCGGATGCC TGCGCGGGGT GCACGCCGGG
GTTGGTCTGG ATTGTACCAG TTGTCACGGC AGCCTGGAGG ATCATGCTCT GAGCCTGCTG
AAAAAGGAAT TACGGGCCGG GAAAAAGGGC GCGGCCCGGA TGATGACCCA TCTCGAACCC
AATACAGTGG ACAAGGTCCA GCACATCCGC CCGCGGACTC CGTGGATCAA CGAACCGGAC
TGCCTCAATT GCCACGTGGA TTATGGCAAG CCGGAAAGTA AGGATGTTTC CGGATTCAAC
AAGTGGACCT CCGGCGCCGA CGAACTTTTC CGCCTGCGTC ACGAGGAGAC CGGAACCATC
ATGTGCGAAG CGTGCCACGG CTCGACCCAC GCCAACTATC CGGCCACCAA TATGTACGGC
AAAAATCGGG ACAATATCCA GCCGCAGCAA TATCAAGGCA ATTCGCTACC AATTTCCTCG
AACAAGAACT GCGCGGTCTG CCACACCATG GATATGGGCT TCGATATGCA CCATCCCAAT
ATCTATCGGG ACTTCCGTAA TACCCAATTG CTGGAGGACG GGGACGGTTC GTAA
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| Protein sequence | MNYPVWELFA AGGGLPIALM AIVHVFVAHF AVGGGLFLVL TERKAYRENS KSILEYTRKH
AKFFLLLTMV FGGLTGVGIW FTISVLSPGA TSVLIHNFLY GWATEWVFFV VEIVALFVYF
YTFGKMDQQR HLTVGWIYFG AAWASLFLIN GIIAFMLTPG EWLQTGNFWH GFFNPTFWSS
LVFRTFMAIV LAGVFGFVTA TFMKDQQARA QLIRYNARWL LVPMVFLVAS GWWYLQSVPE
PARELILDRS PELVPYFKAF LWLSGAVFLG GLLLTARGGR RWQRPLAFVL MALALGYMGS
FEYIREAGRH PYLIYDYMYS NGILTSQEER INAQGFLASA KWTSFDTVTP DNRQAAGREI
FRLQCMNCHS VDGPQNDILP LTAKYDLFAM DAQLDGLGKL NDYMPRFMGT RQERKALAAY
IVSDLHGKKP AEPHEAGAIA QRQHAVPPFD PDSDDYVLLA WNNLGMHCIS DSSDWWVLLP
PANDLFAQLI RRGPIPEVVT KGVEIEYAVE EGFENPAGKV PFWDNVEALF GTELEDNVGL
SGNGMRGKMH LSKELSAFEA SLVPVVPYPE EGGYMPYPLF HVTAKDAQSG EVLARTSMVA
PTSTEMGCKN CHGGSWRVDG KAGFTDATSM DILATHDKNN RTDLLAAARN GEPKLCQSCH
PDPVLGTEEN PDYPNIMNFP AAIHGWHANY LTDRGAEVCS SCHPSSAAGP TGCLRGVHAG
VGLDCTSCHG SLEDHALSLL KKELRAGKKG AARMMTHLEP NTVDKVQHIR PRTPWINEPD
CLNCHVDYGK PESKDVSGFN KWTSGADELF RLRHEETGTI MCEACHGSTH ANYPATNMYG
KNRDNIQPQQ YQGNSLPISS NKNCAVCHTM DMGFDMHHPN IYRDFRNTQL LEDGDGS
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