| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0439 |
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| Symbol | |
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| ID | 8418244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 541603 |
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| End bp | 542763 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645037000 |
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| Product | Isocitrate dehydrogenase (NADP(+)) |
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| Protein accession | YP_003197314 |
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| Protein GI | 258404572 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.364858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAC GTCAAGTCTA TTGGATTGAG GGCGACGGCA TCGGGGCTGA AGTCTGGCGT
GCGGCGCGCC CGGTATTGGA CGGGGCAATC CGAGCCGCGT ACGGGGAATC GCGCCGGCTG
GTCTGGGAAG AGTTGCTGGC TGGAGAAAAG GCCTACGCCG AAACCGGGAA CTATCTCCCG
GAGGCGACCC TTGCTGCGCT GCAGGGGGCG GATCTGGCCA TGAAAGGGCC CTTGGCGACT
CCGGTGGGAA CCGGCTTTCG CAGTCTCAAT GTGACTTTGC GCCAGACCCT GGAACTCTAT
GCCTGCATTC GGCCGGTGCA GTATTTCCAG GGGATCGAGT CGCCGCTCAA GGCCCCGGAG
AAGGTGGATA TGGTCGTTTT CCGGGAAAAT ACCGAGGATG TCTATGCCGG TATCGAATGG
CCGGCTGGAA GTAAAGAGGC CCGGAAGCTG GCGGCCTTTT TGCGCGAGGA ACTCGGGGCT
CGGATCGATG ACCTGGCCGG GATCGGCATC AAGCCGATGA CCGAAAAAGG CAGCAAGCGG
CTGGTGCGCA AGGCCCTGCA ATTCGCTCTC GACCAGCGGC GCGAGAGCGT GACCCTGGTG
CACAAGGGCA ATATCATGAA ATACACCGAA GGCGCCTTTC GTGGCTGGGG CTACGAATTG
GCCGAAGAGG AATTCGGAAC GCAGACGGTG ACCGAAAGCC AGGACGCTGG CGGCAAACTG
GTGGTCAAGG ACCGCATTGC CGACGCCATG TTCCAGGAGG TCCTGATTTC TCCGGAAAAA
TACGATGTCA TCGCCACGAC GAATCTCAAT GGCGACTATC TCTCCGATGC GCTGGCAGCG
CAGGTCGGCG GTCTGGGATT GGCGCCGGGC GTGAATATGA GCGACCAACT CGGCTTTTTC
GAGCCGACCC ACGGCACGGC CCCGACCATC GCCGGCCAGG ACAAGGCCAA TCCCGGAAGC
CTGATCCTGT CCGGGGCGCT GTTGCTGGAC CACATTGGAT GGCATGAGGC GGCTGGGCTG
GTGCGTGCCG GGGTTGAAGC CGCGCTGGCG ACCAAGGAGG TGACCGTGGA TCTGGCCTCG
CAGATCAGCG GCGCGAAGAC TGTTGGCTGC CAGGGATTTG GGGAACGGAT TCTTCAGGGT
GTGGAAGACG CCGCACAATA G
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| Protein sequence | MDERQVYWIE GDGIGAEVWR AARPVLDGAI RAAYGESRRL VWEELLAGEK AYAETGNYLP
EATLAALQGA DLAMKGPLAT PVGTGFRSLN VTLRQTLELY ACIRPVQYFQ GIESPLKAPE
KVDMVVFREN TEDVYAGIEW PAGSKEARKL AAFLREELGA RIDDLAGIGI KPMTEKGSKR
LVRKALQFAL DQRRESVTLV HKGNIMKYTE GAFRGWGYEL AEEEFGTQTV TESQDAGGKL
VVKDRIADAM FQEVLISPEK YDVIATTNLN GDYLSDALAA QVGGLGLAPG VNMSDQLGFF
EPTHGTAPTI AGQDKANPGS LILSGALLLD HIGWHEAAGL VRAGVEAALA TKEVTVDLAS
QISGAKTVGC QGFGERILQG VEDAAQ
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