| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0423 |
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| Symbol | |
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| ID | 8418228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 519291 |
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| End bp | 520787 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036984 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_003197298 |
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| Protein GI | 258404556 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.268173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAAC ACAGGCTTCT TGAAACTTAT GGACTTGATC TTTTGCGGGC GGTGCTCGAG
ACGACCTCGG ATGCCATCTA CGTCCTGGAC AGTGAGGATC TCGTTGTCGA GCTCAATGCC
CCTGCGGCCG TGCAAAGGGG AGCCCCGTTA GAAACGTTGC GGGGCAGGCC GTGGTATGAC
CTCTTTGACA ATGAGGTCGG GCAGCGGCGG CGACAGATCC TGGCCATGGC CCGGAACCAG
AAAGAGATGC TCCACTATGA GGACCGCATT GAGCCGGGGC TGGTCTTTGA TGTCCGTATC
CAGCCGCTAT TTGACGCCTG CGCCTCGGTG GTGGGCCGGG TGATCTGCAT GCGCGATATT
TCCCAGGCCC GCAAGCAGGA GCGGGAGCGT CTCCGGCTGG GAACGGCCAT CGAGCAGGCG
GTTGAAGCCG TGCTTATCAT GGATGAAAAC CTGGTCATCC AGTACGTCAA CCAATCCTTT
GAGGATCTGA CGGGATATTC CCAGCAGCAG GCCAAGGGGC TGCCTTTGGA TGTCCTGTAC
CAGGATAGCG AGCAGCGGCG TTGGTATGCC GCGATTTCAG CGACGCTGAG CCAGGGCGAG
ATCTGGGTCG GACGGACGCG CAATACCGGC AAGGACGGCC GGTTGTTTCG GGTCGAGAAG
ACCGTGGCCC CAATACGTGG TCAATCCGGG GTTATCCTCG GGTATGTGAG CGTGTGGCGG
GATCTGGGAC CGGTGGAACA GCTGGAACGG CAATTGCGTA CGGCCCAGAA AATGGAGGCC
ATTGGGACCT TGGCTAGTGG GATCGCTCAT GATTTCAATA ACATTTTAGG GCCGATCCTC
TTGAATGCCC AACTCCTCCT GGAGCGATCT CCGCTTTGTG ACGAGGAGCG AGATCTGCTC
CAGGAAATCA ACGATGCCGC TGAGCGGGCC CGCCACTTGG TCCGGCAGAT TCTCCACCTG
GGGCGCCGAC GGGAGGCAGA GCAGCCGGTG CCTTTCCGCT TGAGCACAAT TATCAAGGAG
TGTTGCAAGC TCCTGCGCCC GACCTTGCCC GAGACCCTGC GCATCGAACA CCGTCTGCAT
ACAGAGCAGG ACACCATCGT CGCCGATCCA ACCCAGATCC ACCAGGCAAT CATGAATCTG
TGCACCAATG CAGTGCACGC CATGGATCGG CGGCCGGGGG TCTTGCGGTT TGTCCTCCAA
ACGGCCGATC CGGAAACCAT CAGGACCAAG CCCCAACTCA ACGTCGGCCG TCCGTATATT
TGTTTGGCCA TTGAAGATTC TGGCCGGGGG ATGTCCGAGG AAGTGTTGAG CCAGGTCTTC
GATCCTTTTT TCACCACAAA AAACGACGGG TTGGGCACCG GATTGGGGTT GCCGGTGGTC
CAGAATATCA TCACCCAACT CGGCGGGACA GTAACCGTGC AGAGCGCCCC CGGTCAGGGC
AGTGTTTTTG CTTTGTACCT GCCGCTGGCC CCGGCGGAGG CGTTTATAAA CGAGTGA
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| Protein sequence | MAQHRLLETY GLDLLRAVLE TTSDAIYVLD SEDLVVELNA PAAVQRGAPL ETLRGRPWYD
LFDNEVGQRR RQILAMARNQ KEMLHYEDRI EPGLVFDVRI QPLFDACASV VGRVICMRDI
SQARKQERER LRLGTAIEQA VEAVLIMDEN LVIQYVNQSF EDLTGYSQQQ AKGLPLDVLY
QDSEQRRWYA AISATLSQGE IWVGRTRNTG KDGRLFRVEK TVAPIRGQSG VILGYVSVWR
DLGPVEQLER QLRTAQKMEA IGTLASGIAH DFNNILGPIL LNAQLLLERS PLCDEERDLL
QEINDAAERA RHLVRQILHL GRRREAEQPV PFRLSTIIKE CCKLLRPTLP ETLRIEHRLH
TEQDTIVADP TQIHQAIMNL CTNAVHAMDR RPGVLRFVLQ TADPETIRTK PQLNVGRPYI
CLAIEDSGRG MSEEVLSQVF DPFFTTKNDG LGTGLGLPVV QNIITQLGGT VTVQSAPGQG
SVFALYLPLA PAEAFINE
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