Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0421 |
Symbol | |
ID | 8418226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 515501 |
End bp | 517525 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645036982 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_003197296 |
Protein GI | 258404554 |
COG category | [C] Energy production and conversion |
COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.46069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTCA AAATCGGAGT CTATGTCTGC CACTGCGGCA CGAATATCGC CAGTAAGGTG GACTGCCCTG AGGTAGCGCG TTTCGCCGCT GGCCTGCCCG GCGTGGTGGT GGGCCGGGAC TATAAATTCA TGTGTTCCGA TCCGGGGCAG GACATGATCA TCAAAGATAT TCAGGAACTC GGCCTTAACC GCGTCGTTGT TTCCTCCTGC TCGCCGCGCC TGCACGAAAA GACCTTTCAA AAGGCGTGTC TCCGAGCCGG GCTCAACCCC TTTCTCTTCC AGATGACCTG CATCCGGGAA CATTGCTCCT GGGTCACTGC CGATCCGGCC GAGGCCACTC GCAAGGCCAA GCACCTCGTG GCCGCAGCCG TCAATCGGGT CCAGCGCCAC GCCAAACTCT ACGCCCGGCA GGAACACGTC CATCCCGATG TCCTGGTCGT CGGCGGCGGC ATCGCCGGCA TCCAGGCCGC CCTGGATGTG GCCAAGTCCG GACACCGGGT CCACCTGGTG GAAAAAGCCC CGTCCATCGG CGGGCACATG GCCCAATTCG ACAAGACCTT CCCGACCCTG GATTGCGCGG CCTGCATCTC AACCCCCAAA ATGGTCGCCG TGGCCCAAGA GCCGAACATC AACCTCATGA CCTACGCGGA AGTCCAGGAA GTCAAAGGGT TTGTCGGCAA TTACGAGATC ACCGTCCGCC AGCACCCCCG GTACATCGAC GCCACCAAGT GCACCGGCTG TGGGCTGTGC CTGGAAAAAT GCCCGACCAA GGTTCCCAGC GAATTCGAGG AAGGACTGGG CATGCGCAAG GCCATTTACC GCTATTCCCC GCAGAGCGTC CCGGCCACCC CGGTCATCGA TGCCGACCAC TGCCGCTTTT TAAACGGCAA AAAATGCCAG GTCTGCGCCA AATTCTGCCC CTCTGAGGCC ATTGATTTCA GTCAAAAACC GCAAGACGTC GTCCTCGAAG TGGGCTCCAT CGTCCTTGCC ACAGGGTACG ACGCCTTTGA TCCCGCCGGG CTGGAACAAT ACGGCTACGG CCGCCTGGAC AATGTCTACA CTGCCTTGCA ATTCGAGCGC CTCAATAACG CTGTCGGTCC CACCGGCGGC AAAATCCAGC TCAAGGACGG CTCCGCGCCC CAGAGTGTGG GCATCGTCCA CTGCGTCGGC AGCCGCGACA CGCATTACCA CGAATATTGC TCCCGGGTCT GCTGCATGTA CGCCCTGAAA TACGCCCACC TGATCAAGGA CAAGGTCGGT CACGACGTCG CTATCTCCAA TTTCTACATC GATCTGCGGT GTTTTGGAAA AGGGTACGAA GAGTTTTCCC GCCGGGTCCA GGAAGAAGGA GTCACCTTCA TCCGCGGTCG CCCCGCCGAA ATCACCGACG AGGCCCAATC CCCCGCCGAG GACGGCAAGC TCGTGGTCGT TTGTGAAGAC ACCTTGCTCG GCCGCAATCT GCGGGTGCCC GTGGACATGG TCATTTTGTG CACAGCCATG GAGGCGGGGC GGGATGCCCC GGAGCTGGCC CGGCTTTTTG GCATCAGCCA GGGGCAGGAC GGCTTTTTCC TTGAAGAACA CCCCAAACTC GGACCGGTGA CCACGGCCAC AGACGGTGTC TTCCTGGGCG GATGCTGCCA GGGTCCCAAG GATATCCCGG ACGCGGTCTC CCACGCCTCC GGGGCCGCGG CCCAGGCCCT GGCCCTGGCC ACCCGCGGCG AAGTGGCCAT CTCCCCGACT ACAAGCTGGA TCGACCCGGA TATCTGTATC GGCTGCCAGG TCTGCATCGG GCTGTGCGCC TACAGCGCGA TCACTTTTGA TGCCCGCCGG GGCGTGAGCG TGGTCAACGA GGCCCTGTGC AAAGGATGCG GCAGCTGCGC CGGGTATTGC CCGAGCGGCG CGGCCCAGAT CAAACACTTC AATCAGCAGC AGGTCTTCGC CGAACTCGAA GGCATTCTGG AGCCCGCTGC ACCGCCACCC CCGGCCGAGG AAGAAGCACT CGCCGCGGAA AAAGGGGCCT CATAA
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Protein sequence | MAVKIGVYVC HCGTNIASKV DCPEVARFAA GLPGVVVGRD YKFMCSDPGQ DMIIKDIQEL GLNRVVVSSC SPRLHEKTFQ KACLRAGLNP FLFQMTCIRE HCSWVTADPA EATRKAKHLV AAAVNRVQRH AKLYARQEHV HPDVLVVGGG IAGIQAALDV AKSGHRVHLV EKAPSIGGHM AQFDKTFPTL DCAACISTPK MVAVAQEPNI NLMTYAEVQE VKGFVGNYEI TVRQHPRYID ATKCTGCGLC LEKCPTKVPS EFEEGLGMRK AIYRYSPQSV PATPVIDADH CRFLNGKKCQ VCAKFCPSEA IDFSQKPQDV VLEVGSIVLA TGYDAFDPAG LEQYGYGRLD NVYTALQFER LNNAVGPTGG KIQLKDGSAP QSVGIVHCVG SRDTHYHEYC SRVCCMYALK YAHLIKDKVG HDVAISNFYI DLRCFGKGYE EFSRRVQEEG VTFIRGRPAE ITDEAQSPAE DGKLVVVCED TLLGRNLRVP VDMVILCTAM EAGRDAPELA RLFGISQGQD GFFLEEHPKL GPVTTATDGV FLGGCCQGPK DIPDAVSHAS GAAAQALALA TRGEVAISPT TSWIDPDICI GCQVCIGLCA YSAITFDARR GVSVVNEALC KGCGSCAGYC PSGAAQIKHF NQQQVFAELE GILEPAAPPP PAEEEALAAE KGAS
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