| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0418 |
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| Symbol | |
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| ID | 8418223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 510374 |
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| End bp | 513802 |
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| Gene Length | 3429 bp |
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| Protein Length | 1142 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645036979 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_003197293 |
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| Protein GI | 258404551 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.718645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.455985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAC AAGAATACGC AGCCCTCGTG GTTGGAGCCG GCATCGGCGG CATTCGCGCC
GCCCTGGATC TGGCCGAAAC CGAACACAAG GTCCTCTTGA TCGACAACAA ACCCCACCTC
GGCGGGTTGC TGGCCCAATT GGACTATCAA TTTCCCAGCG ATCATTGCGG GATGTGCAAA
ATGCTCCCTC TGACCGAGCG GGACGATTCG TCCCAATTCT GCCTGCGCAA GGGACTCTTC
CACCGCAACC TGGACATCCT GCTCTCCAGC CGGTTGACCA GTCTGGAGGG GGAACCCGGT
AAATTCCAGG CCGTGGTCAA GCAGCAATCC TCTCTTGTGG ACGCCCACAA ATGCATCAGC
TGCGGGCAAT GCAGCACCGT CTGCCCGGTT CGCATCCCGG ACACCTTCAA CGCCGGACTC
GGTGAACGGG CAGCCATCTA TCTCCCCGTG CCACACAACA TCCCCAACCA ATACGTGGTC
GATCTCGCCC ACTGCACCCG CTGCTGGAAA TGCGCCGAAG CCTGTCCCAC CGGCGCGGTG
GATTTCAAAT TCGCCGAACG CGCGAACTTC CCTATCCTCG TCGCCCACCA GGACAGTTCC
CTGCGCCAAA GTATCGACCA GTCCTTGGCC GATGAGAATT TTCCCCTGCA CTGGGCGACG
ACAGGCGAAG AGGCCCTGCG GATGGTGGAA CAGGAGACCT CTCTGGGCCT GGTCCTGCTC
GACAGCACCT TTGCCGATGT CACCGCCCAG CGCGTCCTGC AGCGCGGCCT GGAAATCCAT
CCCGATCTCC AGGTCGTGGC CATGGCCCCG GAGTCGGTCG CCGAAGCAGC GCAGGCCCTT
GTCGCCAATG GCGCCCGGAC CACCCTGGCT ACGCCTCTGA CTGACGATTT TCCCGGCTGG
CTGGACAAGC TCTATCTCCG GATCACCTCG GAAACGAGCC ACCAATTGGA GGTCGGCGCG
GTCATCCTGG CCGGGGGGTT CGAGTGTTAC GACCCCGCTC CGGTCCACGA TGTCCTCGGC
TACAAAGACC ATCCGCAAGT AGTGACCAGT CTGGAATTCG AACGTTTGCT CAGCTCCACC
GGCCCCTGCG GCGGAGACCT GCAACGGTCC GACGGGAAGC CGGTGCAGTC CATCGCCTGG
CTGCAATGCG TCGGTTCCCG GGACCGGCAG AAAAACGCGG ACTATTGCTC CTCGATCTGC
TGCATGTTCG CCATCAAGGA GGCCCTGCTG GCCAAAGACC ATGCCCGAGA CCAGATCGAG
ACGACTATCT TTGCCATGGA TGTGCGCACC TTCGGCAAGG GATACCAGCG CTACCGCGAT
CACGCCGAGC AGGAACGCGG CGTCCGTTTT GTCATTGCCC GGCCGCACTC CATCATCCCC
GACGGTCACG GGGGGCTTCT CCTGCAATAC ATCGACGAAA ACGGGCAACC GCAAAACGCC
GAGTACGATA TGGTGGTCCT GGCCACCGGC GCCAAACCGC CGCAAGACAT GCCCGGTCTG
ATCCAGGCCA CGGGCATTGA ATGCAACGAA TTTGGCTTCT GCCGTACCGA CGCCCTGGCC
CCGACCCGGA CCAGCCAATT CGGCGTCTTT GCCGCCGGGG CCTTTGGCGA ACCCAAAGAC
ATCGCCGACA CCGTGATCCA GGCCAGTGCC GCAGCCCTGG AGGCTTCCCG CCTGATCTAC
CTCTACGCCG CGCCCAAGCG GTGGGAAAAA GAGCCTGAAC CGACCTACCG CCGCGTCGAG
CAGGAGGCGC CGCGAACCCT CGTCGTCCTC TGCGACGCCT GCCCGACACT GGAACAGAGC
GTGGACATGC CCACGCTCAC CGAGCAATTA CAGCAGATGT CCTCGGTCCA GGAAGTCGTG
CGCATTCCCC AGGCCTGCAC TGAAGCCGGG TGGCAGCGCA TCGAGGACCA GGTCCGCCAG
AGCGCGCCCA ACCGCATCGT GCTTGGGGCC TGCCTGCCGT ACGCCCACGT CCCCCGCTTG
CGCCAGTTGG GCCGGACCGT GGCCCTGGAC CCGGCCTTCA TGGAGGTCGT GGACATCTAC
ACCCCGACCT TTCCGGATAT GCCGCTGACC TCTGAGCAGC GGCTGCGGGA AATTGTCTCC
AATCTCGGCA TGGCCGTGGT CAAAGTCCAA TCCGCTTCCC CCACGCCGCT GCTCAAACCG
GTGCCGGTCA CCCCCAAAGC CCTGGTCGTC GGGGCGGGCC TGGCCGGGAT GACCGCGGCC
ATGGCTGTGG CCGACCACGG CATGGATGCC TATCTGGTCG AAGAGGGTGA CAGCTTGGGC
GGCACCGCCA ACCGGCTGCG TTCGACCCTG GAAGGCTCTG ATCCGGTGAA ATACATCCAG
GATCTCTGCG AGCAGGTCCA GAAGCACCCC AAAATCACCC TGCTCACTGA AAGCCGGATC
ACCTTGTCCA TGGGGCGCGC CGGGCAATTT TTGAGCGCGG TCCAGACCGA GGCTGGCCAG
TCCCTGACCA TCGAACACGG CGCCACCATC CTGGCCACCG GCGGCAAGGA GGCCAAATCC
TACGCCTACG GGTACGGAAC CCGCAAAACC ATCTTCAGCC AGCTGCAGTT TGAAGACAAA
CTCGCCACTG GCGCGATCGA TGCCGGGGCC TTGTCCGGGG TGGTCATGAT CCAATGCGTC
GAATGCCGCG AGGAACCTCG GAACTATTGC AGCCGGGTCT GCTGCGCCAC CGCGGTCAAA
AACGCGATCA CCCTCAAGCG ACGCAACCCG AAGCTGCCGG TCTACATCCT GTACCGGGAC
ATGATGACCT ACGGGTTCAG CGAACACTCC TACACCGAAG CCCGGCGGCT GGGAGTCGTC
TTCATCCGCT ACACCCCGGC GCACAAACCG CAGGTCGAAT GCATGGATGA CGACCGGTAC
CGGGTCACGC TCACCGAACC CATTTTGCAA CGCCCCTTGG AGATCCACGC CGATCTGCTC
GTGTTGGCCA CCGGGATCGT GCCCAATGAG GTCGAAGAAT TGAGCGAAAT CTTCCGTGTC
CCGGTGGACC AGGACGGCTT TTTCCAGGAG GCCGAATCCA AATGGCGGCC CGTGGAATTT
CTGCGCCAGG GCGTCTTCGT CTGCGGACTG GCCCGGGCGC CCGGCAACAT GCGCGAGACA
GTGGCCTCGG CCAAGGCCGC GGCCCAGCGG GCCCTGCGTC TGTTGACCCA CGACCGGATC
GCCGGGGGCA CGGTGACCGC CGAAGTGCGG CACAGCCTCT GCTCGTTGTG TCAGGCCTGC
GTCAACGTCT GCCCCTACGG GGCGCGGAGT CTGGATTGGG AGAACGAACA GATCGTCGTC
GACGAAATCC TCTGCCAGGG ATGCGGGGCC TGCACTGCAG TCTGCCCGAA CAGTGCAGCA
GTCCTGCGTG GCTTCCAGGA CGAACAGGTC CTGGCGGAAA TCGACGCCTC TCTGGGGGTC
GTCCCCTGA
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| Protein sequence | MPTQEYAALV VGAGIGGIRA ALDLAETEHK VLLIDNKPHL GGLLAQLDYQ FPSDHCGMCK
MLPLTERDDS SQFCLRKGLF HRNLDILLSS RLTSLEGEPG KFQAVVKQQS SLVDAHKCIS
CGQCSTVCPV RIPDTFNAGL GERAAIYLPV PHNIPNQYVV DLAHCTRCWK CAEACPTGAV
DFKFAERANF PILVAHQDSS LRQSIDQSLA DENFPLHWAT TGEEALRMVE QETSLGLVLL
DSTFADVTAQ RVLQRGLEIH PDLQVVAMAP ESVAEAAQAL VANGARTTLA TPLTDDFPGW
LDKLYLRITS ETSHQLEVGA VILAGGFECY DPAPVHDVLG YKDHPQVVTS LEFERLLSST
GPCGGDLQRS DGKPVQSIAW LQCVGSRDRQ KNADYCSSIC CMFAIKEALL AKDHARDQIE
TTIFAMDVRT FGKGYQRYRD HAEQERGVRF VIARPHSIIP DGHGGLLLQY IDENGQPQNA
EYDMVVLATG AKPPQDMPGL IQATGIECNE FGFCRTDALA PTRTSQFGVF AAGAFGEPKD
IADTVIQASA AALEASRLIY LYAAPKRWEK EPEPTYRRVE QEAPRTLVVL CDACPTLEQS
VDMPTLTEQL QQMSSVQEVV RIPQACTEAG WQRIEDQVRQ SAPNRIVLGA CLPYAHVPRL
RQLGRTVALD PAFMEVVDIY TPTFPDMPLT SEQRLREIVS NLGMAVVKVQ SASPTPLLKP
VPVTPKALVV GAGLAGMTAA MAVADHGMDA YLVEEGDSLG GTANRLRSTL EGSDPVKYIQ
DLCEQVQKHP KITLLTESRI TLSMGRAGQF LSAVQTEAGQ SLTIEHGATI LATGGKEAKS
YAYGYGTRKT IFSQLQFEDK LATGAIDAGA LSGVVMIQCV ECREEPRNYC SRVCCATAVK
NAITLKRRNP KLPVYILYRD MMTYGFSEHS YTEARRLGVV FIRYTPAHKP QVECMDDDRY
RVTLTEPILQ RPLEIHADLL VLATGIVPNE VEELSEIFRV PVDQDGFFQE AESKWRPVEF
LRQGVFVCGL ARAPGNMRET VASAKAAAQR ALRLLTHDRI AGGTVTAEVR HSLCSLCQAC
VNVCPYGARS LDWENEQIVV DEILCQGCGA CTAVCPNSAA VLRGFQDEQV LAEIDASLGV
VP
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