| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0413 |
|---|
| Symbol | |
|---|
| ID | 8418218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 505277 |
|---|
| End bp | 505678 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645036974 |
|---|
| Product | cytochrome c class III |
|---|
| Protein accession | YP_003197288 |
|---|
| Protein GI | 258404546 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.168464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAC AGATCTGTTT CGCCCTGGCC TGTTTGGTTG TGGTCGGTTT CGCTGTGCTG
CCCACATTGC AAGCCCAGAT GCCGCCCTCG AACATCACCT ACGAGGCTCC GGAAATCATG
CCCCGGCTGG GTCCGAGCCA CTTTTCCCAT GATTCCCACT ACGCCCATGA CTGCATGACC
TGCCACCATA TGTGGGACGG CTTTTCCGAG ATCAAGAGCT GCTCCGCCGA GGGGTGCCAC
GACCAGCGGG GCACCATGAA AATGGAAGGC AGCACCATCT ATTACGCTTT CCACAAAAAA
TCGAGTCAAG CCAGCTGCCT GGGCTGCCAT ATGCAGCTCA AGAAAGCCGG TGAGCCCACC
GGTCCTATCG GCTGCACGAC CTGCCACGAG AAACAGGATT AA
|
|---|
| Protein sequence | MKKQICFALA CLVVVGFAVL PTLQAQMPPS NITYEAPEIM PRLGPSHFSH DSHYAHDCMT
CHHMWDGFSE IKSCSAEGCH DQRGTMKMEG STIYYAFHKK SSQASCLGCH MQLKKAGEPT
GPIGCTTCHE KQD
|
|---|
| |