Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0400 |
Symbol | |
ID | 8418205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 488133 |
End bp | 488429 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645036962 |
Product | Protein of unknown function DUF1778 |
Protein accession | YP_003197276 |
Protein GI | 258404534 |
COG category | [S] Function unknown |
COG ID | [COG4453] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00028613 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.219232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAATA CAACCAAAAG AGAAAAATGC TCCGAACGTT TCAGTTTTCG GATTTCCGCC CGAAACAATG AGCTCATTCG GTCTGCTGCC CAACTCAAAA ATATGAGTGC GTCCCAATAT GCAGCCGAAA GCGCAGCCAA TCAAGCCGAG ATGGACCTTG CAGACAGGCG CTCTTTCTCG CTCTCCGAGG GGCAAATGCA GGAATTTCTC AATGCCTTGG ATCGTCCGAT CCAGGAAAAG ACCCGTTTGC GCCAACTCTT CAGAGAAAAA ACGATTTTGG ACCGGGACAG TGAATGA
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Protein sequence | MPNTTKREKC SERFSFRISA RNNELIRSAA QLKNMSASQY AAESAANQAE MDLADRRSFS LSEGQMQEFL NALDRPIQEK TRLRQLFREK TILDRDSE
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