Gene Dret_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0400 
Symbol 
ID8418205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp488133 
End bp488429 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content49% 
IMG OID645036962 
ProductProtein of unknown function DUF1778 
Protein accessionYP_003197276 
Protein GI258404534 
COG category[S] Function unknown 
COG ID[COG4453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00028613 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.219232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATA CAACCAAAAG AGAAAAATGC TCCGAACGTT TCAGTTTTCG GATTTCCGCC 
CGAAACAATG AGCTCATTCG GTCTGCTGCC CAACTCAAAA ATATGAGTGC GTCCCAATAT
GCAGCCGAAA GCGCAGCCAA TCAAGCCGAG ATGGACCTTG CAGACAGGCG CTCTTTCTCG
CTCTCCGAGG GGCAAATGCA GGAATTTCTC AATGCCTTGG ATCGTCCGAT CCAGGAAAAG
ACCCGTTTGC GCCAACTCTT CAGAGAAAAA ACGATTTTGG ACCGGGACAG TGAATGA
 
Protein sequence
MPNTTKREKC SERFSFRISA RNNELIRSAA QLKNMSASQY AAESAANQAE MDLADRRSFS 
LSEGQMQEFL NALDRPIQEK TRLRQLFREK TILDRDSE