Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0386 |
Symbol | |
ID | 8418191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 473305 |
End bp | 474609 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 645036950 |
Product | hypothetical protein |
Protein accession | YP_003197264 |
Protein GI | 258404522 |
COG category | [S] Function unknown |
COG ID | [COG2006] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.590413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTCG ACATACAATA TAAAAGTTTA TCGCTAGATA AAAACAACAT AGATGTTCGT CCAGGTGATT GGGTGGTTAT AAAGCCTAAT CTTGTCAAAG AATGTAAAGA AAGTGATGAA AGTGAATGGG AAAGTGTTAT AACTTCGCCT GCTTTAATTG ATAGGGTTTG TGAAATTGTT TGTGAAAAGC TTAATGGGAA AGGAAAAATA TCAATCTGTG ATGCTCCGCA AACAGATTCA TCATTTTTTA AAATATCTGA AAGAGCTGGT CTTTACGCTA TAGCTAAAAA ATATATGGCT CGATATCAAA TATCGATTGA GGTTTTCGAT CTGAGAAATG AAGAATGGAC TAATAAAAAA GGAATCATTT CCGAGCGCAA AAAACTTAGC GGGGATCCAC AAGGTTCTAT AGCTTTTAAT GTGGGACGCG CTAGTTTTTT TTATGGTTAT AGGGGTGAAG GTAAATATTA TGGCGCTGAC TATGATAGTG CTATAGTGAA TAAACACCAT TGTGGGGAAA AGCAGGAATA CCTCATTTGT GCTACACCTG TACTTTGCGA TGTTTTAATC AATATGCCTA AACTTAAAAC GCATAAAAAA ACCGGCGTTA CGTTAAGTTT AAAAAATTTG GTAGGAATTA ATGCCGATAA GAATTGGCTG CCACACCATA CTGAAGGGGA TCCTTCATCC GGTGGTGATC AGTTTCCTGA ACTTTCGTTC AAGAAGAGAC TTGAACAGGT GGCAGTTAGA AATGTTAGAA GAATGGCCCT AGCGATACCA TTGTTGGGGC CTAAAATGGC TCAATATTTG CGAAAAGCTG GGACTAAAAC TTTTGGCAGT GGAGACGAGG TCATTCGAAG CGGGAATTGG TATGGTAATG ATACTACTTG GCGTATGGTA CTGGACTTGA ATCGATGTCT TTTGTATGGG AATCCAGATG GCACCTTGCG CACATCAAAT CCAAAGCGAT ATTATACAGT TATAGATGGC ATTGTCGGCA TGGAAGGCAA TGGCCCCATG CAGGGCGAGC CTGTGGCAAG CGACCTAGTC ATCTCCGGCG CTGACCCAGT TGCGACGGAT ATGGTAGCCG CCAAACTAAT GGGGTTTGAT TGGCGCAAAA TTCCTGTTAT TCGAGAGGCT TTCAAGGTGC AAAATTATCC CATTACATTG TCTTCTCCAA AAGAGGTTTA TATTTCAAGC AATAACTCAG AGTGGTGCGG TCTTTTTTCA GATATTGAAA AAAAGAATTT TTTAAGTTTT AAGCCCCATT TCGGATGGCA AGGCCACATT GAGTATGAAA AATAA
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Protein sequence | MNVDIQYKSL SLDKNNIDVR PGDWVVIKPN LVKECKESDE SEWESVITSP ALIDRVCEIV CEKLNGKGKI SICDAPQTDS SFFKISERAG LYAIAKKYMA RYQISIEVFD LRNEEWTNKK GIISERKKLS GDPQGSIAFN VGRASFFYGY RGEGKYYGAD YDSAIVNKHH CGEKQEYLIC ATPVLCDVLI NMPKLKTHKK TGVTLSLKNL VGINADKNWL PHHTEGDPSS GGDQFPELSF KKRLEQVAVR NVRRMALAIP LLGPKMAQYL RKAGTKTFGS GDEVIRSGNW YGNDTTWRMV LDLNRCLLYG NPDGTLRTSN PKRYYTVIDG IVGMEGNGPM QGEPVASDLV ISGADPVATD MVAAKLMGFD WRKIPVIREA FKVQNYPITL SSPKEVYISS NNSEWCGLFS DIEKKNFLSF KPHFGWQGHI EYEK
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