Gene Dret_0361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0361 
Symbol 
ID8418166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp449376 
End bp450194 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID645036927 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_003197241 
Protein GI258404499 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGT CAGACCCCCA AGCTTATCTC CTGACCGCCG TCCACGCCGC CCTTCACGCC 
GGCCGCGCTA TCCTCGACGT CTACGAGACG GAAAATTTCG ACGTGGAGAT GAAAAGCGAC
GACTCGCCCC TGACCCGGGC CGATCGCCAA GCGCACGCTG TTATTCAGGC GGCCTTGGAA
CCGACCGAGG TGCCGATCCT GAGCGAAGAA GGCAAAGCCA TCGACTACAG CGAGCGTTCC
GCTTGGCCGG AGCTGTGGAT CGTGGATCCC CTGGACGGGA CCAAAGAATT CATCAAGCGC
AACGGCGAAT TCACAGTTAA TATCGCGCTT GTTCAGGACC ACCTCCCGGT CTTGGGCGTC
ATCTACGTCC CGGTCACCCA GACGTGTTAT TGGGCCTGTG CCGGCCTCGG CGCGTGGCGT
TGCCAGCTGC CGCCGGACGC AGCGATTGCG GATCTGGACT CTCTCCGCGC CCAGTCGGTG
GAACTGCCCC AGCCGATGGG GATTCCGTCG CCTCGGGCCT TGGTTATCGT CGGCTCCCGC
TCCCACGCCA CCCCTGAACT TGAAGCCTTT GTTGCGGATA TGCGCCAGCA CTACGGCGCG
GTCGATTTTA CCGCTGCCGG CAGCTCGCTC AAGATCTGCC GCGTTGCCGA AGGCTCCGCG
GACATCTACC CCCGCCTCGG TCCGACTATG GAGTGGGACA CCGCCGCCGG CCAAGCCATC
GCCGAGATGG CCGGGAAGTC GGTGACGGTC TGGGAGACAG GCGAGCGCCT GCGCTACAAC
CGGGAGGAGT TGTTGAATCC GTGGTTCATC GTCCGCTGA
 
Protein sequence
MSLSDPQAYL LTAVHAALHA GRAILDVYET ENFDVEMKSD DSPLTRADRQ AHAVIQAALE 
PTEVPILSEE GKAIDYSERS AWPELWIVDP LDGTKEFIKR NGEFTVNIAL VQDHLPVLGV
IYVPVTQTCY WACAGLGAWR CQLPPDAAIA DLDSLRAQSV ELPQPMGIPS PRALVIVGSR
SHATPELEAF VADMRQHYGA VDFTAAGSSL KICRVAEGSA DIYPRLGPTM EWDTAAGQAI
AEMAGKSVTV WETGERLRYN REELLNPWFI VR