| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0357 |
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| Symbol | |
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| ID | 8418162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 446020 |
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| End bp | 446910 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645036923 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003197237 |
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| Protein GI | 258404495 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAA TAGACGAACA CTCCGATAAA ACGAAAGAAA TCATCTATAT CGCCCACCCC
GGGCAGGTGT CCCCTCAGGC CGACGATGAG ATCGATCTCG TCGAACTCTG GCTGATTCTG
TGGAGGCGCA AATGGCTTGT TGCCGGTGTG ACCATCCTGG CCACACTGGC AGCAACATTC
ATCACTGTGT TCGGCATCCA GCCTGCATAC AAGGCCACGG CGACCATCCG GGCTGTCGAG
ACCGAGGAAT TTTCCAACAA AGACTTTCTG GAATCTGTGC TGACATCCAA TATCTTCAAA
CGGAAAGTTA TTGAGCAAAA CTCCCTCTTG CCCCACTATT TTCCTGAAAA ATGGAACCCG
CAAGAAGGGA CTTGGCGCAG CGGGGTGGAC ATCCCGACAA GCACCCAAGT GCTGGCCAGC
GGGCGGTTCC CGCTCAAGAT CCAAACCAGC GGCCACGAAA TTTCCCTGAC CTGGACTGAT
GCCGATCCAC ATTTTGCCGC CAATCAGCTT GAGAAGACCC TGGATGTTTT CCGAAGCCAT
CTCAGCCAGG CCACGCCAGC GGAGACAAAA CAGATTGCAA CCATCGATAC GCACATCCAA
TCGCTCCAGG AAATCAAAGG TGCTACCGAA GCCCCTGAAG AATTGAATAT CGAGCTGGCA
TCGCTAATTC GGAAAAAGGC CGAGTTGGAA TCCCAGCGGG ACCTGTATCA GTCCTTTACG
CTCATCAACG AACCGTTGCC GCCGTCATCA CCAACCAAGC CACGAACACA ACTCATTCTC
GCCTTGACCT TGGCGACATC GCTTTTTGCC GGTGTCTTCC TGGCCTTCCT GCTGGAGTTT
ATCAAAAACG CCAGGCAGCG CATCCGGGAA GGGTATTACG AGAAGGAGTA A
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| Protein sequence | MTKIDEHSDK TKEIIYIAHP GQVSPQADDE IDLVELWLIL WRRKWLVAGV TILATLAATF
ITVFGIQPAY KATATIRAVE TEEFSNKDFL ESVLTSNIFK RKVIEQNSLL PHYFPEKWNP
QEGTWRSGVD IPTSTQVLAS GRFPLKIQTS GHEISLTWTD ADPHFAANQL EKTLDVFRSH
LSQATPAETK QIATIDTHIQ SLQEIKGATE APEELNIELA SLIRKKAELE SQRDLYQSFT
LINEPLPPSS PTKPRTQLIL ALTLATSLFA GVFLAFLLEF IKNARQRIRE GYYEKE
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