Gene Dret_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0346 
Symbol 
ID8418151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp430838 
End bp431317 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID645036912 
Producthypothetical protein 
Protein accessionYP_003197226 
Protein GI258404484 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTTG TTCATAACAG CCGGGTCCAG CCGGAATGGA TCGATTACAA CGGGCATATG 
AGCGAGGCCT TTTACGTCCT TATTTTTGGC CATGCCACTG ATGCCTTCCT GGATGCCATC
GGGCTGGATG CCGAGACCCG CTCGCAGGCC AAGGTGTCGG CCTATACGGT CGAAGCCCAT
ATTCGGTATG TCCGCGAGGT ACAGGAAGGA GAAGCGGTGG AAGTCCAGAC GCAGCTTGTG
GGGCATGACG CCAAGCGAGC GCATCTTTTC CACACCATGG CCCGGGCAGC GGACGGCACA
GTGGTGGCCA CGGAAGAGAT CCTTGTGCTG CATGTGGATA CGCAGGCGGG AGGAACCGCC
CCGTTTCAGC CAGTTGCAGC GAATGCCCTG GAGCAACTGC AAAAGCGACA CGACCGCCTT
CCCCGCCCGC AGGACGTGGC CCGGGCGATC ACGATGCCGT CTCGTTCTGT CACAGGATAG
 
Protein sequence
MPLVHNSRVQ PEWIDYNGHM SEAFYVLIFG HATDAFLDAI GLDAETRSQA KVSAYTVEAH 
IRYVREVQEG EAVEVQTQLV GHDAKRAHLF HTMARAADGT VVATEEILVL HVDTQAGGTA
PFQPVAANAL EQLQKRHDRL PRPQDVARAI TMPSRSVTG