Gene Dret_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0344 
Symbol 
ID8418149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp428954 
End bp429826 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID645036910 
Productprotein of unknown function DUF849 
Protein accessionYP_003197224 
Protein GI258404482 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAAG ATGTCATACT TACCTGTGCT TTGACCGGTG CTGGCGATAC GACCGCCAAA 
AATCCCCATG TGCCGGTCAC GCCCGAAGCG ATTGTTGCGG ACGCCCTGGA GGCCCACGAA
GCTGGAGCCG CTGTGGTGCA CATCCATGTC CGGGACCCGG AGACCAAGCA GGCCGCCCGG
AGACACGATC TCTACGCCGA GGTCATGCAG CGCCTCCAGG ACAGCGGCAG CGAGGTCATC
GTCAACCTCA CGGCCGGGAT GGGCGGCGAT TTTGCACCTG ATGCTGAAAA TCCGGCTCAG
GGCGGTCCGG GAACGGACAT GGCCACGGCC CACGAGCGTG TTGCCCACGT ACTCGACCTC
AAACCGGAGA TCTGTACGTT GGACTGTGGG AGTCTGAATT TCCCCGACGC GGCGTACGTC
GCCACCCCCG ATCAACTGCG GGAAATGGCC CAGGCCATCA CTTCGGCCGG GATCAAACCT
GAGATCGAGT GCTTCGAATT GGGGCACATC TGGCTGGCGA AAACGCTGCT GACCGAAGGG
TATCTCAATC ACCCCCCGCT GTTTCAACTC TGCATGGGCA TCCCGTTCGG AGCCGAGGCT
ACGCCAATGA ATATGCTCTG CATGCGGGAC AATCTGCCCC AAGGCAGCCA GTGGGCCGCG
TTCGGGATCG GGCGTATGCA GATGCCGTTT GCCGCTCAAT CTGCGCTGCT CGGCGGTCAC
GTCCGTGTCG GGCTGGAAGA CAATATTTAT CTGGAAAAAG GGGTCCCGGC CACGAACGCC
CAATTGGTGA CCAAGGCCCG GACCATGCTC GAAGCCATGG GCTGCCGGTT GCTGGATGCA
AACGCGGCCC GCGACCACCT CGGGCTTGCC TAG
 
Protein sequence
MRQDVILTCA LTGAGDTTAK NPHVPVTPEA IVADALEAHE AGAAVVHIHV RDPETKQAAR 
RHDLYAEVMQ RLQDSGSEVI VNLTAGMGGD FAPDAENPAQ GGPGTDMATA HERVAHVLDL
KPEICTLDCG SLNFPDAAYV ATPDQLREMA QAITSAGIKP EIECFELGHI WLAKTLLTEG
YLNHPPLFQL CMGIPFGAEA TPMNMLCMRD NLPQGSQWAA FGIGRMQMPF AAQSALLGGH
VRVGLEDNIY LEKGVPATNA QLVTKARTML EAMGCRLLDA NAARDHLGLA