| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0340 |
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| Symbol | |
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| ID | 8418144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 422243 |
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| End bp | 423259 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036905 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
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| Protein accession | YP_003197220 |
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| Protein GI | 258404478 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC TCAGAATCGG CATCAACGGT TTCGGCCGTA TAGGACGGCA AGTACTCAAG
GCGTTGCGGC TGAATTATCC GCAGACGGTC CAGGTTGTCG CGATCAACGA TCTTTTTGAC
GCCCAGCAAA ACGCGAATCT GTTCCGGCAC GATTCCACCT ACGGCCGGTT TCCGGAATCG
GTCGATGTCG ACGGCGATGT GATGACCATC GGGGACTGGT CCATCCACAA TTTTGACTAC
ACCGATCCCA AGCGAATTCC CTGGGCGGAT ATGGGCGTGG ACGTGGTTAT CGAGTCCACA
GGAATATTTC GCACCGGGCC GCAGGCCAGA GCTCATCTGG AAGCCGGCGC GAAGAAGGTC
CTGATCACTG CCCCGGGCAA AGAGGTGGAC CGGACTATTG TCCTGGGCGT CAACGAGGCG
ACCTACCAGC CGCAGAGTGA TCAGATCCTG TCCAACGCTT CATGCACCAC AAACTGTCTG
GCTCCGGTGG CCTGGGTCCT TCAGCAGAAT TTCGGCATCC GCATCGGCTC CATGTGCACG
GTGCACGCCT ACACCAACGA CCAACGTATC CTGGATTTGC CGCACAAGGA CCCCCGGCGC
GCCCGTGCTG CCGGGCAGAA TATCATCCCG ACGACCACCG GCGCGGCCAA ACTGGTGGGG
CAGGTCATCC CGGAACTGGA AGGCAAGATC GACGGCTACG CTATGCGGGT GCCGGTGCCC
ACGGTTTCGG TGGTCGATTT CACCGCCTGG GTGGATCGTG CCACGACCAC GGAAGAACTC
AACGCCACGC TGCAGGCGGC GGCCAACGGA GAGTTGGAGG GCATACTGGG CTACAACCAT
GAACCACTGG TTTCCTCGGA TTTTGTCATG GATCCCCGGT CCTCGATAGT GGATCCGGCC
TTCACTTCGG TTCGCGACGG TAATTGGATC AAGGTTATGG CCTGGTACGA CAACGAATGG
GGCTATTCTT GCCGTGTGGC GGATCTGGCG GAACTGATCC GGCAGAAAGG GGTTTGA
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| Protein sequence | MTKLRIGING FGRIGRQVLK ALRLNYPQTV QVVAINDLFD AQQNANLFRH DSTYGRFPES
VDVDGDVMTI GDWSIHNFDY TDPKRIPWAD MGVDVVIEST GIFRTGPQAR AHLEAGAKKV
LITAPGKEVD RTIVLGVNEA TYQPQSDQIL SNASCTTNCL APVAWVLQQN FGIRIGSMCT
VHAYTNDQRI LDLPHKDPRR ARAAGQNIIP TTTGAAKLVG QVIPELEGKI DGYAMRVPVP
TVSVVDFTAW VDRATTTEEL NATLQAAANG ELEGILGYNH EPLVSSDFVM DPRSSIVDPA
FTSVRDGNWI KVMAWYDNEW GYSCRVADLA ELIRQKGV
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