| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0315 |
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| Symbol | |
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| ID | 8418119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 389990 |
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| End bp | 391936 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645036880 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_003197195 |
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| Protein GI | 258404453 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCACGTT ATTATATTAC CACGCCAATT TATTATGTAA ACGCCAATCC CCATCTGGGA
CACGCGTATA CGACCATTGT CGCCGATTGC GTGAACCGTT TTCACCGGCT TTTGGGGCAG
GAAACCTTTT TTCTGACCGG GACCGACGAG CACGGCGACA AGATTGTCCA GGCAGCCGAA
GACGCCGGAC AGTCGCCTCA GGAATACGTC GATCGCATCA GCAGCAAGTT CCAGCAGCAA
TTGCCGGATC TCAATATCTC CAATGACCGT TTCATTCGGA CCACAGACAG CGACCACAAA
GACTGCGTGC AGCGTTTTCT GCAGCAGGTG TACGACAACG GCGATATCTA TTTCGGAGAA
TACGGCGGGT ATTATTGCTT TGGGTGTGAG CGGTTCTATA CCGAAAAAGA ACTCGTCGAC
GGCCTGTGCC CCGACCATCT CAAGCCCCCG AAGTACATCG AGGAAAAGAA TTATTTCTTC
CGGATGCAAA AGTACCAGGA CTGGCTGGTC CAGTATATCC AGGACAATCC TGGGTTTATC
CAGCCGGAGC GTTACCGCAA CGAGGTGTTG GGTATGCTTC GCGAGCCGCT CGACGATCTG
TGCATTTCCC GGCCGAAAAC ACGGTTGACC TGGGGGATCG AACTCCCTTT TGACGACCGG
TATGTGACCT ATGTCTGGTT CGACGCGTTG ATCAATTATA TCACAGCCCT GGGGTGGCCT
GACGGCGACA GGTACCGGCA ATTCTGGCCG GTTGCCCACC ATCTGGTGGC CAAGGATATT
CTCAAGCCCC ACGCGATCTT CTGGCCGACA ATGCTCAAGG CAGCCGGCCT TGAACCGTAT
CAGGGACTGC ATGTCCACGG CTATTGGACG GTCAACGAGA CCAAGATGTC CAAGAGTCTC
GGCAATGTAG TCGCCCCCCT GACCATGAGG GACACCTACG GCCTCGACGG CTTCCGTTAT
TTTCTGCTCC GGGAGATGCA GTTCGGTCTG GACGCCTCGT TTTCCGAAGA AGGGCTCGTG
GCCCGCTTCA ACGCTGATTT GGCCAATGAT CTCGGCAATC TGTTCAACCG CGCCCTGGCC
ATGACCCATA AATACTTTGG CGGCCGGGTC CCGTCTCCGG GGGCTTTGGA GGATGAAGAC
CACGCCATCC GCCAACTCGG TGTGCGCGCT GTACAGGGGT ATGTCGACAG CGGCAAATCC
TTTGCCTTTG CCGCAGGCCT GCGCCAGTTG TGGGACCTTG TCCGGGGACT GAATAAATAT
ATCGACGCCA CTGCGCCGTG GACGTTGTAC AAGGCCGGTG AGACCGAGCG CTTGGGCACG
GTCATGTACA CGGTTCTTGA AGGAATGCGT CAGGTGGCTC TGGCGCTCTG GCCAGTCATG
CCGGACGCCA GCGGGAGTAT GCTCCAGCAA TTGGGCCAGC CGACCGATCC GAGCGGACGG
AATATGGAGG AGGATGTCCG GCAGTGGGAT ATTTTGGCGG TGGGCACCGA AGTGGCGAAA
AAATCGAATC TGTTCCCCAG ACAGGAAGCG GTCGCCAAGA AAGAGGAGAC CCCGTCTGAA
GGCCAGAGCG GAAAGAATAA GCCCAAAAAA CAGGCATCGG CCCAAAAGGA GCCTGAAACC
GGCGTGGCGA GTTTTGAGGA TTTTCAGAAG GTCGAGTTGC TGGTGGGAAC AATCCTGGCA
GCAGAACCGG TGGCCAAGGC GGATAAGCTC TTGCAATTGC AAGTCGATGT CGGGGAAGAA
GAGCCGCGAC AGGTGGTTTC CGGCATCGCC GAGCATTTTG CTCCAGAGGC GGTGGTCGGG
CAGCAGGTCG TTGTGGTGGC CAATCTGAAA CCGCGCAAGG TCTTCGGGAT CCTCTCCCAG
GGCATGATCC TGGCGGTCCA CGCAGAAAAG GGATTGCAGC TGGTGCAGCC CGGGGGAGCG
GTTCCAGCCG GCAGCCGCGT CAGTTAG
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| Protein sequence | MSRYYITTPI YYVNANPHLG HAYTTIVADC VNRFHRLLGQ ETFFLTGTDE HGDKIVQAAE
DAGQSPQEYV DRISSKFQQQ LPDLNISNDR FIRTTDSDHK DCVQRFLQQV YDNGDIYFGE
YGGYYCFGCE RFYTEKELVD GLCPDHLKPP KYIEEKNYFF RMQKYQDWLV QYIQDNPGFI
QPERYRNEVL GMLREPLDDL CISRPKTRLT WGIELPFDDR YVTYVWFDAL INYITALGWP
DGDRYRQFWP VAHHLVAKDI LKPHAIFWPT MLKAAGLEPY QGLHVHGYWT VNETKMSKSL
GNVVAPLTMR DTYGLDGFRY FLLREMQFGL DASFSEEGLV ARFNADLAND LGNLFNRALA
MTHKYFGGRV PSPGALEDED HAIRQLGVRA VQGYVDSGKS FAFAAGLRQL WDLVRGLNKY
IDATAPWTLY KAGETERLGT VMYTVLEGMR QVALALWPVM PDASGSMLQQ LGQPTDPSGR
NMEEDVRQWD ILAVGTEVAK KSNLFPRQEA VAKKEETPSE GQSGKNKPKK QASAQKEPET
GVASFEDFQK VELLVGTILA AEPVAKADKL LQLQVDVGEE EPRQVVSGIA EHFAPEAVVG
QQVVVVANLK PRKVFGILSQ GMILAVHAEK GLQLVQPGGA VPAGSRVS
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