| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0313 |
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| Symbol | |
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| ID | 8418117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 387024 |
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| End bp | 388445 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036878 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_003197193 |
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| Protein GI | 258404451 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAA AGAAATCCAA GATTCTTCCC CGGCGTTCTA TGCCCATGCA GGACCCCGCC
GCACGAGTGG GGAATTTCAA TGAGGTCGCC AACGGCTATA GTCTTGAGCT GGCCCAGGAA
GAGGCGCGCC GTTGCCTGCA GTGCAAAACG CCCACCTGTC AGGACGGTTG CCCTGTTGAA
GTCGATTGCA AACGTTTTAT TCGGGAGTTG GCCGAAGGGC AGGTGGAACA GGCGTTTCGG
ACCATCAAGG AAACCAACAG CCTGCCCGCG GTCTGCGGCC GGGTCTGTCC GCAGGAAAAC
CAGTGCGAAG GCCGCTGCAA ACTCCGGCCG ACGGGGCAAC CCGTGGCCAT CGGCCGTCTG
GAGCGGTATG TGGCCGACGC CTTCTATGCT GGCACGGCCT GTGAAGCCAC GGTTGGCCGT
GAGGATTGCC CCATGATCCG TGAGGATCTC CGGGTGGCGG CCATCGGCTC CGGACCAGCG
AGTTTGACCC TGGCTGGGTA TTTGGCAGCG CAGGGGGTCA AGGTCGAAGT TTTCGAGGCC
TTGCATCTGC CCGGCGGCGT GCTGTCTTAC GGCATCCCGG AATTTCGGCT GCCGAAATCC
ATTGTCCGCA CCGAGGTCGA AACCCTGAAG GAACAGGGCG TGGAATTCCA CATGAACTGG
GTCGGCGGCA AAACCATGAC CGTCGGTGAT CTTTTTGATC AAGGATTCAA GGCCGTTTTT
CTGGGCCTTG GGGCCGGACT GCCCCGGTTT ATGAAGTTGC CGGGAGAAAA TCTGATCGGC
GTTTTTTCAG CCAATGAATA TCTGACCCGG GTCAACCTCA TGGGCGGATA CCGTTTTCCG
GACTATGACA CGCCCGTGTT TCCCGGTCGC AAGGTCACGG TCATCGGTGG CGGCAATGTG
GCTATGGATG CTGCCCGGAC CGCTCTGCGG CTCGGGGCTG AAGAGGTCCG CATCGTTTAC
CGGCGGACCC AGGAAGAAAT GCCCGCACGG CTCGAGGAAC TGGAACACGC CCTCGAAGAA
GGGGTCCAAC TGGAAATCCT GGCCTGTCCG GTCGCTTTTC AGGGCGACGA GGGGGGACGG
CTGACCAGCA TGCGGGTCCA GAAGATGTGT CTGGGCGAGC CCGACGAGAG CGGTCGCTGC
CGCCCCATGC CAGTGGAGGA CGAAGCCTAC GACCTGGAGA CCGATCTGGC GATTATCGCC
GTGGGATCCG GCCCGAATCA GATCCTGCTC AATGCCACAC CGAATTTGGG GCTCAACAGC
CGCGGCTATA TCGAGGTCGA CCAGGAAACC CTGGAGACCA ACATGCCGAT GGTTTTTGCC
GGCGGAGATA TCGTCACCGG CGCCGCGACC GTGGTTGAAG CCATGGGGGC CGGACGGCAG
GCGGGCAAGG AGATCAGCCG GCGCCTGCTC AAGCAGGGGT AA
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| Protein sequence | MTKKKSKILP RRSMPMQDPA ARVGNFNEVA NGYSLELAQE EARRCLQCKT PTCQDGCPVE
VDCKRFIREL AEGQVEQAFR TIKETNSLPA VCGRVCPQEN QCEGRCKLRP TGQPVAIGRL
ERYVADAFYA GTACEATVGR EDCPMIREDL RVAAIGSGPA SLTLAGYLAA QGVKVEVFEA
LHLPGGVLSY GIPEFRLPKS IVRTEVETLK EQGVEFHMNW VGGKTMTVGD LFDQGFKAVF
LGLGAGLPRF MKLPGENLIG VFSANEYLTR VNLMGGYRFP DYDTPVFPGR KVTVIGGGNV
AMDAARTALR LGAEEVRIVY RRTQEEMPAR LEELEHALEE GVQLEILACP VAFQGDEGGR
LTSMRVQKMC LGEPDESGRC RPMPVEDEAY DLETDLAIIA VGSGPNQILL NATPNLGLNS
RGYIEVDQET LETNMPMVFA GGDIVTGAAT VVEAMGAGRQ AGKEISRRLL KQG
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