| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0310 |
|---|
| Symbol | recA |
|---|
| ID | 8418114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 382259 |
|---|
| End bp | 383326 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645036875 |
|---|
| Product | recombinase A |
|---|
| Protein accession | YP_003197190 |
|---|
| Protein GI | 258404448 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0468] RecA/RadA recombinase |
|---|
| TIGRFAM ID | [TIGR02012] protein RecA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTA AACCGAATGT TTCACCGGAA GAATTGCGGA AAGAAGCCCT TGATACGGCG
CTGACCACCA TTGAGCGCAA ATACGGCCAA GGGGCGGTGA TGCGGTTGTC CGATGACGCC
CACCAAGCAG TGCCCTTCAT TCCGACGGGC TCCGTGGGGC TGGATCTGGC CCTGGGCATC
GGCGGCATCC CGCGAGGCCG CGTGGTGGAA ATCTATGGGC CCGAGTCCTC GGGGAAGACG
ACCCTGGCCT TGGAAATTAT CGCCCAGGCC CAAAAGGGTG GCGGCAATGC CGCTTTCGTC
GATGCCGAAC ACGCCTTGGA CGTCAACTAT GCCAGGCGCC TCGGGGTCAA GACCGACGAA
CTGGTCGTCT CGCAGCCGGA CTACGGCGAA CAGGCCCTGG AAATCGCCGA CCTGCTCGTG
CGCTCCGGGG CGTTGGATGT CATTGTCGTC GACTCGGTGG CCGCGCTTAT TCCGCAGGCC
GAACTCGAGG GCAACATGGG CGAAACCCAG GTCGGCAGCC AAGCCCGACT CATGTCCCAC
GCCATGCGGA AGTTGACCGG CTCTATCCAC CGCTCCAAAA CCTCGGTCAT CTTTATCAAC
CAGATCCGGA TGAAGATCGG CATGACCGGG TACGGCAGCC CGGAAACGAC CACAGGCGGC
AACGCCCTCA AATTCTATTC CTCGGTCCGG CTGGATATTC GCCGCATTCA GACTTTGAAG
GACAAGGAAG AGTTTTACGG CAACCGGGCC CGGGTCAAGG TGGTCAAGAA CAAGGTCGCG
CCCCCGTTTC GCGAGGCCCA GTTTGATATC CTGTATGGAA CCGGGATCTC CAAAGAAGGC
GAACTCCTGG ATATGGGCGT GGAGCATGGC ATCGTGGACA AGTCCGGATC CTGGTACGCC
TACGGCTCAG AGCGTCTGGG ACAGGGCAAG GAAAATGTGC GGGCCTTTTT GCAGCAAAAC
CCGGAAATCA GTCAGGATAT TGAAAACAAA CTTCTCGTGC ATCTGGGAAT GAAGGATAAC
GGGCAGGAGC CAGCCGCTGA CGGCGGCGAG GAACAAACCG AAGAATAG
|
|---|
| Protein sequence | MARKPNVSPE ELRKEALDTA LTTIERKYGQ GAVMRLSDDA HQAVPFIPTG SVGLDLALGI
GGIPRGRVVE IYGPESSGKT TLALEIIAQA QKGGGNAAFV DAEHALDVNY ARRLGVKTDE
LVVSQPDYGE QALEIADLLV RSGALDVIVV DSVAALIPQA ELEGNMGETQ VGSQARLMSH
AMRKLTGSIH RSKTSVIFIN QIRMKIGMTG YGSPETTTGG NALKFYSSVR LDIRRIQTLK
DKEEFYGNRA RVKVVKNKVA PPFREAQFDI LYGTGISKEG ELLDMGVEHG IVDKSGSWYA
YGSERLGQGK ENVRAFLQQN PEISQDIENK LLVHLGMKDN GQEPAADGGE EQTEE
|
|---|
| |