| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0308 |
|---|
| Symbol | |
|---|
| ID | 8418112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 379955 |
|---|
| End bp | 380884 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645036873 |
|---|
| Product | Na+/Ca+ antiporter, CaCA family |
|---|
| Protein accession | YP_003197188 |
|---|
| Protein GI | 258404446 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATA TCATCCCCGT GGTCCAAATC ACCATCAGTG TCCTGCTTTT ATGGAAAGGC
GCCGACTGGA TTATTGAAAG TGCGGCTGCT CTGGCCCGGC GCTTGCGGAT CTCCGAGCTG
GTTATCGGCC TGACTGTCGT GGCGATGGGT ACCTCACTGC CGGAATTTCT GGTCACCTCC
ACAGCGGCCT TCAAAGGCTA CAGCGACATT TCCCTTTCAA ATATCGTCGG CTCCAACGTC
TTCAATCTGA GCATCATCCT CGGTCTGATG GCCCTCATGC GGCCGGTGCC GACGCGGCGG
GTCATGCTCG TTCGCGAAGG ATCGGTCCTC TTGGGCGTGG TCGGTTTTGT CCTTTTGGCC
TCCTGGGATC TCGTCATGGG GCGGGGGGCC GGACTCATCC TCGTGACGAC ACTGATTGTC
TTTCTCCTGT TGCTCTTTAC TCGCGCCCAG CGGCTGCCGC CGGGGTTGGA GACCGAAACC
CAACGGGAAG GGTCCTTCAA AGATGTCGCG ATCATCCTGT TAGGGTTTGC GGCCGTGGCC
CTGGGCGGCA ATTGGCTGGT CGAGGGGGCC TCTACCCTGG CCAGAGGGTT CGGGATCAGC
GAATGGATCA TCGGGGTGAC CATTGTTGCC GCCGGGACGT CCCTGCCCGA ATTGGTGACC
TGCCTGCAGG CTTCCTTGAA AGGCAAAAAC GACATGATCA TGGGCAATCT TCTCGGTAGC
GATCTCTTCA ATTTTGCCGG GGTGCTGGGA TTGACCTGCC TGCTCAACCC GTTGCATGTC
TCGGCTTCGG CCCTGCCGAG TCTGCGCCTG CTGGTACTCA GTCTGGTGGT GGTCCTGGCC
TGTACGCGCA CGGGATGGCG AATCAGCCGG GGGGAGGGCG CGCTTTTGGT CTGTATCGGT
CTGGCTCGCT GGACCCTGGA TATCCTTTAA
|
|---|
| Protein sequence | MTHIIPVVQI TISVLLLWKG ADWIIESAAA LARRLRISEL VIGLTVVAMG TSLPEFLVTS
TAAFKGYSDI SLSNIVGSNV FNLSIILGLM ALMRPVPTRR VMLVREGSVL LGVVGFVLLA
SWDLVMGRGA GLILVTTLIV FLLLLFTRAQ RLPPGLETET QREGSFKDVA IILLGFAAVA
LGGNWLVEGA STLARGFGIS EWIIGVTIVA AGTSLPELVT CLQASLKGKN DMIMGNLLGS
DLFNFAGVLG LTCLLNPLHV SASALPSLRL LVLSLVVVLA CTRTGWRISR GEGALLVCIG
LARWTLDIL
|
|---|
| |