| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0304 |
|---|
| Symbol | |
|---|
| ID | 8418108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 376122 |
|---|
| End bp | 376709 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645036869 |
|---|
| Product | GrpE protein |
|---|
| Protein accession | YP_003197184 |
|---|
| Protein GI | 258404442 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGA AAAACACCCC CAACGAACAG GAACAGCAGG CCGCTGAAGC GCAAGAAGTG
GAACAACCCG CTGAAACGGT CCCCGGCGAG GAACTCACCG ACGAGGAACT CTACGCCCTG
TGCCAGGACC GGATCTGTCC GGATTGTCCT CAGATGCACG AGGCCAAAAA TGAAAAACTC
CGCGCTTTGG CCGATGCTGA GAACTATAAG CGCCGCATGA CCAAGGAAAA GGACGACCAC
GTCAAATTCG CCTCGGAAAA GGTGCTCGAG GATATCGTCC CCATCATCGA CACCCTGGAA
CTCGCCCTGC AACACGGCAG AAATGTCGAG GGCTGCCAGG ATGTCGTTCA AGGGGTTGAA
ATGACGCACA AGCTATTCCT GGACACCTTG CAGAAGCACG GCCTGGATCA ACTCGGCAGC
ACCGGGGAAG AATTCGATCC CGCGATCCAT GAGGCCCTGG CCGAAGAAGA GCGCGCCGAC
ATGGACAAGG GCATGGTCTG CCAGATCATG CAGCGCGGCT ACCGTCTCAA AGGGCGCCTG
TTGCGTCCCG CCAAAGTCAT GGTCAGCAAA AATTGTGAAA ATTCGTAA
|
|---|
| Protein sequence | MKQKNTPNEQ EQQAAEAQEV EQPAETVPGE ELTDEELYAL CQDRICPDCP QMHEAKNEKL
RALADAENYK RRMTKEKDDH VKFASEKVLE DIVPIIDTLE LALQHGRNVE GCQDVVQGVE
MTHKLFLDTL QKHGLDQLGS TGEEFDPAIH EALAEEERAD MDKGMVCQIM QRGYRLKGRL
LRPAKVMVSK NCENS
|
|---|
| |