| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0302 |
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| Symbol | |
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| ID | 8418106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 371475 |
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| End bp | 373592 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645036867 |
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| Product | hypothetical protein |
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| Protein accession | YP_003197182 |
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| Protein GI | 258404440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0292766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCG CATACGACCA GACCGCGCCC CGCCACGCGG TTTTTGCGCC CCGTACCCAA
ACCGGGGCGA ACGGTCTGTA CACCCGGCGA CGAGCCCTTA TGATGCCTCA AAAACTTTGC
CTTATATGCC TGATCGGCTT CGTGTTGATC TCCGGCTGTG CAGTCAAGCC ACCCTTGCCC
ACCCAGGAAA AGCCGCCCAC GGCCCTGGAA GAACAGGCGG CCAGGATGTG GCAGGCCCAG
AATTACGCCC GCAGTCTGCG CCTGTATCAA GAACTTCTCC AAACCCAGGA TCTGGACCAG
GAAACGCAAC GCACGGCTTG GCGCCGAGTC AGTCGCAGTG CACTGGAGTT GGGTCGCTTC
GAACGTGCGG TGCAGAGTCT GCGCCAGTGG GCCCAGGTCG ACCCTAAGAC CCGGGAAAAC
TGGACCTGGC ATGAACTCTA CACCCAGGCT CTGGGAGAGA CCGAAGGCGC CCAGAAGGCC
CGGGAGCACC TCCATACGGT TGCTGTTGCA CCGAACACGG TCTGGAGCGT CCGCCGCCCA
GCCGCCGAAC GGCTGACCAC CGCCTACTGG CAACAAGGCA GCTTTGCGCG CTTCGCTGCA
GTCCAGAGCG CGGTGCACCA AGCCGCCTCC ACCCCGGAAC AGCGCAAACT TATCGAATCC
TCCCTGCTCG AGACCGTCCA GGACGCCCCT GAGGCCCAAT GGCAAAATCT ATTGGACCAG
ATTGGTCCCT TAGGACCAAA GCGCTATCCG CACAATATCC TGCAGTGGGT CTGGACCCGG
CGCCAACTTG CTGAGGAACG TATCGGCTGG GCGGCTGCCT GGCACCGATT GGAAGCTGTC
GTCCGCGGGG AAACCCTAGC CCTGACGCCT GTTTTCCGAG AGACCTTGGA CGCCCTTCGT
CAGGAGTACG GCACGCCGGA ACAGGAGATC GGCCTGCTCG TGCCCTTGAG TGGCTCCTAC
GCCCGCTTCG GACGCGATAT TGTCCGCGGC GCCAGTGCCG CCCAGTGGCA GATCTCACGG
CACGGGGGCA AAATCACCGT TCACGTCATC AACACCGCGG CCGAGAACTG GCAACACCAG
TTGAACCGCT TGCCAGAGAA CATCCAACTC ATCGGCGGGC CACTGCGGCA GTCCAGTTGG
AAGGCGATCA CCCAGCTCGC CCCCACGAAG CGGGCTTTTT TCACCTTCCT GTCCAGCCTC
CCCGCCAGCA CAGAAGGACG CCAAGCCTGG CGCTTTTTTG CCAGCACCGC AGACCAGAGC
CGCGCCCTGG TCAAAGCGGC CTCGGCTCTG GGGATCGACA AAATCGCCAT CCTGTATCCC
CAGGAAACCT TTGGCCGGCG CATGGCGGCC TCGTTCTGGG AGCAGAGCCG CCAGCACAAC
GCGACCATCA CCGGTCTGGC CCATTACCTT CCCGACGCTC CGACCCGCTG GAGCGGGACG
GTGGGCGATT TTCTGCGCGT CCCGGACAAA GAAACGAGCA GCGAAACCAC AGGTGAGGGG
AATCAGACCG CTCGCCCGGA ACCCGACTTC GGGGCTGTCT TCCTGCCGGA CACGCTCTCC
AAGGCCCAGC TGATGGTCCC CAATTTCTTT TACCACGACG AAGACCGGCT TCTGTTTCTC
GGACCCCGGC TCTGGAGCCA GGCCCTGGCC CGGGGCGCGG ATCTGGAGCA GCGCTACTTC
CGGCTGGCGC TCACCCCGGG CGCCTGGAGT CCCGGGATGC AACGGACCGG ACTGGACGCT
TTACGGCAGG AACTGGAGAT GTCCGGTCTG CCCGGGCCGA ATTTCTGGAG CGGGCTCGGC
TATGATTTCG TCCGCTTTGC CGCCAGGTTC GATGATCCCG CTCCCGGGTT CACTGCGGAC
GAACTCAACA GCCGGCTCCA TGCGTTTTCC GGTTTCTCCT GGGCCTTGGC CCCGATCCAA
TGGGACCGGG AAGGACACGC CCGCCAGGAT CTTTTTGTAT TTCAACCTGT TTCCGGAGGA
CTGCGCCCGG CCAACCTCGA TGCCCTCGGC CGTCGCCTGG AAAGAACAAA AAAGGCCCAC
GCCGCAAGGC GCCAAGCCCG AAACGACAGC AACAGTACAC AACCCAAAGA ACAGACCGTG
TCCTCTTCCG AACAATAA
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| Protein sequence | MIRAYDQTAP RHAVFAPRTQ TGANGLYTRR RALMMPQKLC LICLIGFVLI SGCAVKPPLP
TQEKPPTALE EQAARMWQAQ NYARSLRLYQ ELLQTQDLDQ ETQRTAWRRV SRSALELGRF
ERAVQSLRQW AQVDPKTREN WTWHELYTQA LGETEGAQKA REHLHTVAVA PNTVWSVRRP
AAERLTTAYW QQGSFARFAA VQSAVHQAAS TPEQRKLIES SLLETVQDAP EAQWQNLLDQ
IGPLGPKRYP HNILQWVWTR RQLAEERIGW AAAWHRLEAV VRGETLALTP VFRETLDALR
QEYGTPEQEI GLLVPLSGSY ARFGRDIVRG ASAAQWQISR HGGKITVHVI NTAAENWQHQ
LNRLPENIQL IGGPLRQSSW KAITQLAPTK RAFFTFLSSL PASTEGRQAW RFFASTADQS
RALVKAASAL GIDKIAILYP QETFGRRMAA SFWEQSRQHN ATITGLAHYL PDAPTRWSGT
VGDFLRVPDK ETSSETTGEG NQTARPEPDF GAVFLPDTLS KAQLMVPNFF YHDEDRLLFL
GPRLWSQALA RGADLEQRYF RLALTPGAWS PGMQRTGLDA LRQELEMSGL PGPNFWSGLG
YDFVRFAARF DDPAPGFTAD ELNSRLHAFS GFSWALAPIQ WDREGHARQD LFVFQPVSGG
LRPANLDALG RRLERTKKAH AARRQARNDS NSTQPKEQTV SSSEQ
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