Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0300 |
Symbol | gatA |
ID | 8418104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 369509 |
End bp | 370978 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645036865 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_003197180 |
Protein GI | 258404438 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.921372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCA CTTCCTTGAT TCAGCTCCGC GACGCCCTGC GCTGCGGCGA TATTTCAGCC GAAAATGCGG TCAACACCTG TCTGGACCGC ATCCGGACCA CCGAACCGGT CGTCCAGGCC CTGGTCCATA CCGATGCCGA AAACGCCCTG AACACGGCCC GGAGTCTCGA TGCCCAGGGG CCTTCCGCGG ACATGCCGCT ATGGGGCGTT CCGATTATCC TCAAGGACCT TCTGGCGACC AAAGGGCAGC CCACCACCTG CTGCTCGAAG ATGCTCGAGA ATTTCACCCC GTTTTACAAC GCCCACGTTG TGGACCGCCT CCAGCAGGCT GGGGCCATTG TACTCGCCAA GTCGAACATG GATGAGTTCG CCATGGGATC TTCCACGGAG AACTCGGCCG TCCAGCAGAC CAAAAACCCC TGGGATACGA CCCGGGTCCC GGGCGGCAGT AGTGGCGGTT CGGCCGCGGC CGTGGCCGCG GGACAAGCCC CTGGGGCCCT GGGCACCGAC ACCGGGGGAT CCATCCGGCA GCCGGCCGGG TTCTGTGGCA TTGTCGGCCT GAAGCCGACG TATGGCCGGG TCTCCCGCTA CGGGCTGGTC GCCTACGGCT CCTCGCTGGA CCAGATCGGT CCTATGACCC GTTGCGTGGC AGACAGCGCG GCAATACTCC AGGCCATTGC CGGCCATGAC CCTAAGGACT CGACCTCCGT GGCTATCGAA GTGCCCGACT ACACGGCCGC CTTGGAGCAG ACCACTGATC TCTCCGGCTG GCGCATCGGC GTGCCCAGGG AATATTGGGG GGACGGGCTC AGCGACGAGG TAGCGGAGAC CTGCCGCGCG TTTCTGGACC AGGCCCGGGA GCACGGGGCT GAACTCGTGG ACGTCTCCCT GCCGCACACC AAATACGCCA TCGCGACCTA TTACATCCTG GTCATGGCTG AAGCGAGTTC GAACCTCTCC CGCTTCGACG GAGTGCGTTA CGGCCATCGT GCCGATGACG CCGCAAACCT CATGGAAATG TACAGCAAAA GCCGCAGCCA GGGGTTCGGC CGGGAGGTTC AGCGTCGTAT TCTGCTGGGG ACCTACGCCC TTTCCGCGGG GTACTACGAC GCCTACTACA AAAAAGCCGC CCAAGTCCGG CGTTTGATCC GGGACGATTA TCTTCAGGCC TTTGCGTCTT GCGATCTGCT CTGCGGGCCG GTGGCACCGA CGACCGCCTT TGGATTGGGA GAAAAAACAG ACGACCCGCT GCAAATGTAC CTGACCGATA TCTTTACCAA CCCGCTCAAC CTGACCGGGT TGCCGGGTCT CAGCCTGCCG GCTGGAATCG GCAGGACCTC GGGGCTTCCG GTCGGGGTCC AGCTTTTTGG CCCCGCCTTT GGTGAATCGG CCTTGCTCCA GGCCGGACAC GTTTTGGAAC AGGCCCGGGG GCCACTGCCC GAGCCAACAG CCCTGGCTGG TCTGGACTAA
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Protein sequence | MQTTSLIQLR DALRCGDISA ENAVNTCLDR IRTTEPVVQA LVHTDAENAL NTARSLDAQG PSADMPLWGV PIILKDLLAT KGQPTTCCSK MLENFTPFYN AHVVDRLQQA GAIVLAKSNM DEFAMGSSTE NSAVQQTKNP WDTTRVPGGS SGGSAAAVAA GQAPGALGTD TGGSIRQPAG FCGIVGLKPT YGRVSRYGLV AYGSSLDQIG PMTRCVADSA AILQAIAGHD PKDSTSVAIE VPDYTAALEQ TTDLSGWRIG VPREYWGDGL SDEVAETCRA FLDQAREHGA ELVDVSLPHT KYAIATYYIL VMAEASSNLS RFDGVRYGHR ADDAANLMEM YSKSRSQGFG REVQRRILLG TYALSAGYYD AYYKKAAQVR RLIRDDYLQA FASCDLLCGP VAPTTAFGLG EKTDDPLQMY LTDIFTNPLN LTGLPGLSLP AGIGRTSGLP VGVQLFGPAF GESALLQAGH VLEQARGPLP EPTALAGLD
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