Gene Dret_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0298 
Symbol 
ID8418102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp366998 
End bp368293 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content63% 
IMG OID645036863 
ProductRNA modification enzyme, MiaB family 
Protein accessionYP_003197178 
Protein GI258404436 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGAAC CCCGTTTTGC CCTGCACACG CTTGGCTGCA AGGTCAATCA ATACGAAAGC 
CAAGCCCTGC GCGAGGCGTG GCTGCAGCGT GGATACCGCG AAGCCAGCAC TGATGAAGTC
CCCGAATGGA TCGTGGTCAA TTCCTGTGCC GTGACCTCTG GGGCGGTCCA GGATACGCGT
AAACTTGTCC GCAAGCTCCA CCGCAACCAT CCCGAGGCCG CTATCGTGGT CACCGGATGC
GCCGCTCAGG TCTTTACCGA GGAAATGGCG GCCTTGCCCG GGGTGCTGCG CACCGTACCG
CAGCAGGCCA AGGCCGATCT CTGCGTCGGA CCGGACGCGC TCCACTTCGC CTGTCGCGAA
GCGGACCACT TCCCCGAATT TCCAGTCACC GCCTCATCGC GAGCCCGGGG ACTGCTCAAG
GTGCAGGACG GTTGCTCCCA CGGCTGCACC TATTGCATTG TGCCCCACAC TCGGGGTCCT
GCCGTGACCA GATCCCCGGA AAAAAGTCTG GCCGAGGCCA GACACCTTTT CAGGGGCGGC
CTGCGGGAAT TGAGTGTCAG CGGCATCAAC TTGCGGCAAT ACGGCCGGGA TCTGACCCCG
CCATTGGACT TTTGGGATTT TCTCGCCTGG CTCGACGCCA ACCTCGCCAC AGAGTGGGCC
GGCCGGGCCC GGTTGCGGCT CAGTTCCCTG GAGCCCTCGG AACTCACTGA TAAGGCCCTG
GATACCTTGC GCCGATGCCG CCTGGTGGCC CCGCACCTTC ACCTCTCCCT GCAAAGTGGC
AGCCCGGAAA TCCTGCGCCG AATGGGCCGC GGTCACTATC ATCCCGACAC AATACGAACG
TTTGTGGACC GGCTGCAAGA AATCTGGCCC CATTTCGGCC TCGGCGCCGA TTTTTTACTG
GGATTTCCCG GAGAGGACGA TGCCGCCTTT GAAACCACCG CTGCCCTGGT CCGCGACCTC
CCCTTTACCT ACGGGCATGT CTTCCCGTAT TCTCCCCGTC CCGGCACGCC GGCAGCAACC
TTCACCGACC AGGTCGCCGA GCCGATCAAA CGGGAGCGGT GCGCCATATT GCGGAGCATC
CTGGAGGACA AGCGGACCGC TTTTTTGCAG CAGCAAGCCC AGCGGGACCA CATTCCATTC
ATTGTCGAAA AGCATCCGGC CCAGGGCATC AGCGACACCT ATGTCCCATG CCGCGAGATT
TCCGGAGCGG CTCCGGCCGT TCGCTCTCTG GTCCAGGCAC GTCCGGTCGG CTGGGATGAC
AAGGGGCTGC TGGTCCAACT GGAAACCACG GCGTGA
 
Protein sequence
MSEPRFALHT LGCKVNQYES QALREAWLQR GYREASTDEV PEWIVVNSCA VTSGAVQDTR 
KLVRKLHRNH PEAAIVVTGC AAQVFTEEMA ALPGVLRTVP QQAKADLCVG PDALHFACRE
ADHFPEFPVT ASSRARGLLK VQDGCSHGCT YCIVPHTRGP AVTRSPEKSL AEARHLFRGG
LRELSVSGIN LRQYGRDLTP PLDFWDFLAW LDANLATEWA GRARLRLSSL EPSELTDKAL
DTLRRCRLVA PHLHLSLQSG SPEILRRMGR GHYHPDTIRT FVDRLQEIWP HFGLGADFLL
GFPGEDDAAF ETTAALVRDL PFTYGHVFPY SPRPGTPAAT FTDQVAEPIK RERCAILRSI
LEDKRTAFLQ QQAQRDHIPF IVEKHPAQGI SDTYVPCREI SGAAPAVRSL VQARPVGWDD
KGLLVQLETT A