Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0298 |
Symbol | |
ID | 8418102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 366998 |
End bp | 368293 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645036863 |
Product | RNA modification enzyme, MiaB family |
Protein accession | YP_003197178 |
Protein GI | 258404436 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCTGAAC CCCGTTTTGC CCTGCACACG CTTGGCTGCA AGGTCAATCA ATACGAAAGC CAAGCCCTGC GCGAGGCGTG GCTGCAGCGT GGATACCGCG AAGCCAGCAC TGATGAAGTC CCCGAATGGA TCGTGGTCAA TTCCTGTGCC GTGACCTCTG GGGCGGTCCA GGATACGCGT AAACTTGTCC GCAAGCTCCA CCGCAACCAT CCCGAGGCCG CTATCGTGGT CACCGGATGC GCCGCTCAGG TCTTTACCGA GGAAATGGCG GCCTTGCCCG GGGTGCTGCG CACCGTACCG CAGCAGGCCA AGGCCGATCT CTGCGTCGGA CCGGACGCGC TCCACTTCGC CTGTCGCGAA GCGGACCACT TCCCCGAATT TCCAGTCACC GCCTCATCGC GAGCCCGGGG ACTGCTCAAG GTGCAGGACG GTTGCTCCCA CGGCTGCACC TATTGCATTG TGCCCCACAC TCGGGGTCCT GCCGTGACCA GATCCCCGGA AAAAAGTCTG GCCGAGGCCA GACACCTTTT CAGGGGCGGC CTGCGGGAAT TGAGTGTCAG CGGCATCAAC TTGCGGCAAT ACGGCCGGGA TCTGACCCCG CCATTGGACT TTTGGGATTT TCTCGCCTGG CTCGACGCCA ACCTCGCCAC AGAGTGGGCC GGCCGGGCCC GGTTGCGGCT CAGTTCCCTG GAGCCCTCGG AACTCACTGA TAAGGCCCTG GATACCTTGC GCCGATGCCG CCTGGTGGCC CCGCACCTTC ACCTCTCCCT GCAAAGTGGC AGCCCGGAAA TCCTGCGCCG AATGGGCCGC GGTCACTATC ATCCCGACAC AATACGAACG TTTGTGGACC GGCTGCAAGA AATCTGGCCC CATTTCGGCC TCGGCGCCGA TTTTTTACTG GGATTTCCCG GAGAGGACGA TGCCGCCTTT GAAACCACCG CTGCCCTGGT CCGCGACCTC CCCTTTACCT ACGGGCATGT CTTCCCGTAT TCTCCCCGTC CCGGCACGCC GGCAGCAACC TTCACCGACC AGGTCGCCGA GCCGATCAAA CGGGAGCGGT GCGCCATATT GCGGAGCATC CTGGAGGACA AGCGGACCGC TTTTTTGCAG CAGCAAGCCC AGCGGGACCA CATTCCATTC ATTGTCGAAA AGCATCCGGC CCAGGGCATC AGCGACACCT ATGTCCCATG CCGCGAGATT TCCGGAGCGG CTCCGGCCGT TCGCTCTCTG GTCCAGGCAC GTCCGGTCGG CTGGGATGAC AAGGGGCTGC TGGTCCAACT GGAAACCACG GCGTGA
|
Protein sequence | MSEPRFALHT LGCKVNQYES QALREAWLQR GYREASTDEV PEWIVVNSCA VTSGAVQDTR KLVRKLHRNH PEAAIVVTGC AAQVFTEEMA ALPGVLRTVP QQAKADLCVG PDALHFACRE ADHFPEFPVT ASSRARGLLK VQDGCSHGCT YCIVPHTRGP AVTRSPEKSL AEARHLFRGG LRELSVSGIN LRQYGRDLTP PLDFWDFLAW LDANLATEWA GRARLRLSSL EPSELTDKAL DTLRRCRLVA PHLHLSLQSG SPEILRRMGR GHYHPDTIRT FVDRLQEIWP HFGLGADFLL GFPGEDDAAF ETTAALVRDL PFTYGHVFPY SPRPGTPAAT FTDQVAEPIK RERCAILRSI LEDKRTAFLQ QQAQRDHIPF IVEKHPAQGI SDTYVPCREI SGAAPAVRSL VQARPVGWDD KGLLVQLETT A
|
| |