Gene Dret_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0296 
Symbol 
ID8418100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp365270 
End bp366151 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content58% 
IMG OID645036861 
Producthypothetical protein 
Protein accessionYP_003197176 
Protein GI258404434 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAA GCATGACCGG CTACGGCCGT TGGAGCGGTC AGAGTGCCGC CCTGGCCCAG 
ACCTGGGAAA TCAAAAGCGT CAACGGCAAA CAACTTTCCA TTCGCTGGAA AATGCCCCAA
TTCCTGTCCA TGATGGAGCA GGAGTGGGAA AAACAGGTCC GGGAAACCGC CGAGCGGGGC
CGGATCGATA TCCAGCTCCA CCTCCACATC TTTGAAGCCG AAGAGCTCAG CCCCAAGCTC
AACAGCTGGA TCGCCCAATC CATGCTGGAC CAACTCCGGC AGCTGGCTGA AGCCAACGGC
GAGACTCCAG AACTCGATTA CAGCCACCTG TTGCGCATGC CCAGCCTGTG GGAGGAACCG
GATCAGACCC CGCCCCAGGA AATCCTCGAC TCGTTGCAAA CCGGCCTGGA GATGGCCTTA
AGCGCCTGGA ACGACAGCCG GGAGCGCGAA GGGCAGGCCA TGATCGCCGA TCTGCAAAAT
CGCCTGGAAA CCGTCACCAA CTGGGTCGAA CGTATTGCCG AACGGGTACC TACCCTGCCA
GAGCAACGTT TCGCGCTCCT CAAGCAGCGG GCCGAGGCCC TGCTTCAGGA GCAGTCCCCA
AGCCTTTCCC AGGAGAGGCT GCACCAGGAG TTTGCCCTGC TCACCGACAG GATTGATGTC
AGTGAAGAAA TCACCCGTTT GCAGACCCAC CTCCAGGAAC TCCAGCGGCG GTTTGCCATG
GAGACCCCTA GCGGACGCCA CATGGATTTC GTGCTCCAGG AATGTTTCCG TGAGATCAAC
ACCTGCGGCA ATAAAGCCCA GGACAGCGAA GTCAGCCGCT TGGTGGTCAA TGTCAAAACC
GAACTGGAAA AATGTCGCGA ACAGGTGCAA AACATCGAAT AG
 
Protein sequence
MPKSMTGYGR WSGQSAALAQ TWEIKSVNGK QLSIRWKMPQ FLSMMEQEWE KQVRETAERG 
RIDIQLHLHI FEAEELSPKL NSWIAQSMLD QLRQLAEANG ETPELDYSHL LRMPSLWEEP
DQTPPQEILD SLQTGLEMAL SAWNDSRERE GQAMIADLQN RLETVTNWVE RIAERVPTLP
EQRFALLKQR AEALLQEQSP SLSQERLHQE FALLTDRIDV SEEITRLQTH LQELQRRFAM
ETPSGRHMDF VLQECFREIN TCGNKAQDSE VSRLVVNVKT ELEKCREQVQ NIE