| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0283 |
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| Symbol | |
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| ID | 8418087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 345965 |
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| End bp | 349153 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645036848 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003197163 |
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| Protein GI | 258404421 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGG GCAAACATAT GCCGGCAGAA TCGAAGAATG TGTGGCAGAA GCAGCTTTCT
GAATACTTTC GGAAGCATAT CCGCAACCGC GGCAATACCT ATTTCCGTGA GGGGCGCGTT
CGCTTGCGTC AGGCCACGGC CACGAGCGTT AAAGGGACCG TGGACGGCGG ACAGTCCTAT
ACCGTCCACC TCATCGCCGA GGAAGACGGG TTCCGGGTCT ATTGCAGCTG CCCCTATTTC
AGTCAGGGCG GTGCCTGTAA ACATTTATGG GCGGCTATTC GGGCGGCTGA CGCGAAGCTC
GCCGAACGGG CAGCCGCATC GAGGTCCAAG CGGGACCCGC AATCCCAATA CACCTCTTGG
CGTCAGGTGT GGGGTGAGGA AGAAAATACA GCATCGTCGC AATGCGTTCC CATGCCCGGA
GAGTTCTGTC CCTTTTACGG GCTGGAGCGC TTCAGTCAGC GTTGGTACCT GCAGGTATGG
CAGCGGTATA TCTGCAAGGA CGGCAGCATT GGACGGCGCC AGAGCAACAT CACCTACAGA
TTATTGGAGA AAGGACTCCT TTCCGAACCG GACCGCAGGA TAATCCAATG GATGTTCGAG
TCTGGTGCTT CCTTCCTTTT ATCGGCCCGG GCGCTTGGAG CCGAACAACT GTCGTATCTC
TTGCCGTTGC TGGCCAAAAC AGAACGGTGT GCCATTTACC ACAATGACAG CTGCGTGGTT
GAGCAATTCA AACTGGGACG CCCAATGACA GCCGCAGCCC GCTATCAGGG CAAACTGGTG
GGGAAAGAGC AGGATTTGTT CTTGAGCCGG GTTCTTGTCC TCGGCGAGCA GGAGGTTGCT
CCTGATAATG TGGCGGTGTT CTTTCCCACC GAACCGTTTT TCGTGATTCA CAATTCCCGC
CTGTATGCGC TCCGCGAGGA GGTGGGGACG GATATCCAAG CCGTCCAAGC GAATCAACCG
ATCCAGGTTC CCCGAGCGGA GTTGCCGCAA TTTCTGGAAA CTGTGGCCAG GGCCGGAGAA
CTGGAGAGCT TCTCTCTCCC CCAAGAAATT GCCCCGGAGC GGATTGCGCC AGAGCATATC
CGGCCTTGTC TGACGCTGGT CCCGCAGCGC GAGGCGTTAC TGGGGCTGGT CTCATTTTAT
TACGGCGATC GGGAGGTTGC CGCCCATAGC GGAATCCGCA ACGTTTTTGA CGCTCAACAC
TGGGCGTATA TTGAGCGCGA CGATACGGTG GAGGCTTCTG CTTGGTCTGC TTTGCAGGCC
CAGGGATTTG AACACACAGG GGAAGATGGA GTCCGCCGTG CCTGGGAAGA GAACATGGCC
GAGGCCCTGC ACACCTTGAG GCAGCAAGGG TGGCTGCTGC AGGCGCAGAA CAAACAACGG
GTCAAAACTG GTTCGGTATC CAATGTCCAG ATTACCTCGG GGCAGGATTG GTTTGATCTC
TCAGCGGACG TTGATTTTGA GGGCCAGGAG CTTATGGATT TGCCGGCAGT GCTTCAGGCC
TACAAGGACC GTCAACGGTT TGTGGTCCTT GATGACGGCA GTCTTGGGAT GTTGCCGGAG
AAGTGGCTGG CGGACAACGG CTTGGCCTTG CAACTCGGTC GCACAGCCAC GCGCAAAGAG
GCCGCTGAGG ACAACCCCAG CAAGGACGCA CTGCGATTCA CAACGGGACA AGGGGTTCTG
CTCGACAGCG TCGCCCAAAC AACAGACCAT GTGCGCGAGG ATGAGCAGTT TTCTCGCTAT
AGGGAAAAGT TGCACGATTT CAAGGGACTG CGCTCGGTAA CGCCACCCCA GGGGCTCCAG
GCCACGCTTC GGGAGTATCA GCAGCAAGGG CTCAGCTGGC TGGCGTTTTT GGAGGAGTTC
GGTTTGGGTG GCATTCTGGC CGATGATATG GGGCTCGGTA AAACCATTCA GGTCCTGGCT
CATCTCTTAC AGGCCAAGGA ACGTGGAGCT TCCGGCCAGG CTCTTGTCGT GGCACCGACA
TCTCTTGCTT TAAATTGGGC CAGTGAGGCC CGCCGCTTCA CGCCGGAATT GGCGGTGCAT
CTGCATACAG GGCCACAGCG CTTTGCCTGT GAAGAGGCCT GGGAAACGGC GGATGTTGTG
GTTACGACCT ATGGCCTCTT GCGCCAAGAC ACCGTCTTTT TGGCTCAACG CGAATTTGCG
CACCTCATTT TGGACGAAAG TCAGGCCATC AAGAATGCCC AGACCCAGAC CGCACAGTGC
GCCAGGCAGC TTCAGGCGCG TCACCGCCTG TGTCTGACCG GGACCCCGCT GGAAAACCAT
GCCGGGGAAT TGTGGTCGCA GATGGAGTTT TTGAATCCCG GCCTTTTGGG CAGTCTCAAG
ACCTTTGAAG AGGTCTGGAG TGAAGCCCAG CAGAGCAATA CCCCGGAAAA GTGGCAGCAG
TTGCACCGGT TTCTCCGCCC CTTTTTGTTG CGACGGACCA AAGAAGAGGT CATGGCCGAC
CTGCCGGAAA AAATGGAGCA GGTTGTGTCC TGCTCCATGA CGCCGCAACA GGCGAAACTG
TATAGTGAAA TCCGTGACCA TTACCGGGCC CAGGTGTTGT CCCGGGTGGA GGAGAAGGGG
TTGGCCCAAA GCAAGATGCA TGTTTTGGAG GGGTTGTTGC GTCTGCGTCA GGTCGCCTGT
CACCCGAAGT TAGTGGGCGG TAATGGCCAA TACGAATCCG GCAAGCTTCA GGAACTGCGC
GAACGGATTA CGGCCGTTGT GGGCAGTGGA CATAAGGCGT TGGTTTTTTC TCAATTTACG
CGTTTTTTGC GGCTTATCAA GGACATGCTG GAATCGGAGG GCATAGCCTA TTGTTCGCTG
GACGGGCGGA CTCCGGCGAA ACGTCGCCAG GAGCGGGTGG CCCGGTTTCA AGATGTGGAT
GGACCACCTG TTTTTACCAT CAGCTTGAAG GCCGGGGGGA CCGGCCTCAA TCTGACGGCT
GCGGATTATG TGTTCATCGC GGATCCGTGG TGGAATCCGG CCGTCGAGAT GCAGGCCGTG
GACCGGACCC ACCGTATCGG ACAGGATAAG ACCGTATTTA CCTATCGGTT TGTGACCGAA
GGCACTGTGG AAGAAAAGAT TCGCACCCTG CAGAATCAAA AGCAGGAGTT GGTGCAGTCT
GTTTTATCTG GTTCCAAAGG GGTGCTCAAG GAACTCAGCC GCGAGGATCT GGAGGTCCTG
CTCTCCTGA
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| Protein sequence | MVKGKHMPAE SKNVWQKQLS EYFRKHIRNR GNTYFREGRV RLRQATATSV KGTVDGGQSY
TVHLIAEEDG FRVYCSCPYF SQGGACKHLW AAIRAADAKL AERAAASRSK RDPQSQYTSW
RQVWGEEENT ASSQCVPMPG EFCPFYGLER FSQRWYLQVW QRYICKDGSI GRRQSNITYR
LLEKGLLSEP DRRIIQWMFE SGASFLLSAR ALGAEQLSYL LPLLAKTERC AIYHNDSCVV
EQFKLGRPMT AAARYQGKLV GKEQDLFLSR VLVLGEQEVA PDNVAVFFPT EPFFVIHNSR
LYALREEVGT DIQAVQANQP IQVPRAELPQ FLETVARAGE LESFSLPQEI APERIAPEHI
RPCLTLVPQR EALLGLVSFY YGDREVAAHS GIRNVFDAQH WAYIERDDTV EASAWSALQA
QGFEHTGEDG VRRAWEENMA EALHTLRQQG WLLQAQNKQR VKTGSVSNVQ ITSGQDWFDL
SADVDFEGQE LMDLPAVLQA YKDRQRFVVL DDGSLGMLPE KWLADNGLAL QLGRTATRKE
AAEDNPSKDA LRFTTGQGVL LDSVAQTTDH VREDEQFSRY REKLHDFKGL RSVTPPQGLQ
ATLREYQQQG LSWLAFLEEF GLGGILADDM GLGKTIQVLA HLLQAKERGA SGQALVVAPT
SLALNWASEA RRFTPELAVH LHTGPQRFAC EEAWETADVV VTTYGLLRQD TVFLAQREFA
HLILDESQAI KNAQTQTAQC ARQLQARHRL CLTGTPLENH AGELWSQMEF LNPGLLGSLK
TFEEVWSEAQ QSNTPEKWQQ LHRFLRPFLL RRTKEEVMAD LPEKMEQVVS CSMTPQQAKL
YSEIRDHYRA QVLSRVEEKG LAQSKMHVLE GLLRLRQVAC HPKLVGGNGQ YESGKLQELR
ERITAVVGSG HKALVFSQFT RFLRLIKDML ESEGIAYCSL DGRTPAKRRQ ERVARFQDVD
GPPVFTISLK AGGTGLNLTA ADYVFIADPW WNPAVEMQAV DRTHRIGQDK TVFTYRFVTE
GTVEEKIRTL QNQKQELVQS VLSGSKGVLK ELSREDLEVL LS
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