Gene Dret_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0276 
Symbol 
ID8418080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp339230 
End bp340450 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content59% 
IMG OID645036841 
Productpeptidase M29 aminopeptidase II 
Protein accessionYP_003197156 
Protein GI258404414 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2309] Leucyl aminopeptidase (aminopeptidase T) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTATT TGACCCAGGA CCAATTGGAA AAATACGCTG ATGTCCTGCT CTGGGGGCTG 
ACCAAGGCCC GGGCCGGGGA GTACGCCGCC GGTGATGTTG TTTTGCTGCG CTATGATCTG
GACGCGCGGC CTCTGGCCGA CCTCCTTTTT CATAAATCGC TGGAACGCGG ATGGCATCCG
GTGCCCCGCA TGGGGTTGTC GCCGCAGATG GAGAAATCTC TTTTTACGGT TGGCGGCGAC
CAGCAGCTGG AGTTTATTGC CCCGGGCGAC AAAGAGTTCA TGCGCCGCCT GAACGCCAAC
ATCGCTTTGC TGGCCCCGGA ATCCCTGACC CATCTCAAGG ATGTGGATTC AAAACGGATC
GGGAAGACAG CCATTGCCCG GAAACAATTG CGCGACATCC TTGACGAGCG GGAGGCCGAG
GGCCAATTCG GTTGGACCCT GTGTCTGTTG CCCACAGAGG AGTTGGCCGC CAACGCTGGA
TTGTCCATTG AGGAATACAC AGCGCAGATC ATCAAAGCCT GTTATCTGGA CAGTCCGGAC
CCGGTGGCCG AGTGGGAGCG GATTTACGAG CAGGCCGGAC GGATCAAGTC CTGGTTGAAC
AGTCTGGACG TGGATTCATT TCATGTGCAG TCCGCGCATT GCGATCTGAC AGTGACGCCG
GGGCAGGACC GGCAGTGGGT TGGTATTTCC GGACACAATA TCCCCAGCTT TGAACTCTTT
CTCTCGCCGG ATTGGCGCGG GACCCAAGGG ATCTATTACG CCGATCAGCC CTCGTATCGG
AGCGGCAACC TGGTTCAAGG GGTACGCCTG GAATTCAAGG ACGGCGAGGT GGTCGACGTT
CAGGCCGAGG AAGGGGAGGC CTTCACCAAG GACCAGCTGG ACATGGACGT CGGAGCCAGA
CGCCTTGGCG AGTTTTCTCT GACCGACACC CGGTTCTCCA GAATCGACAA GTTCATGGCC
CACACCTTGT TTGACGAAAA TTTTGGAGGC CCCTACGGCA ATTGCCATGT GGCCGTCGGG
GCGTCGTACG CCGACACCTA TGCCCTGGGC GCCGGGGCCC TGGACAAGGC GAAAAAAGAA
GCCTTCGGAT TCAATGATTC CGCGCTACAC TGGGATCTGG TGAACACGGA GGACAAGCGG
GTCACGGCCA GACTCAAAGA CGGCTCGACT GTGCTCATCT ATGAAAGTGG CCGCTTTGCC
GGTCCCGAGG AGGCTTCCTG A
 
Protein sequence
MHYLTQDQLE KYADVLLWGL TKARAGEYAA GDVVLLRYDL DARPLADLLF HKSLERGWHP 
VPRMGLSPQM EKSLFTVGGD QQLEFIAPGD KEFMRRLNAN IALLAPESLT HLKDVDSKRI
GKTAIARKQL RDILDEREAE GQFGWTLCLL PTEELAANAG LSIEEYTAQI IKACYLDSPD
PVAEWERIYE QAGRIKSWLN SLDVDSFHVQ SAHCDLTVTP GQDRQWVGIS GHNIPSFELF
LSPDWRGTQG IYYADQPSYR SGNLVQGVRL EFKDGEVVDV QAEEGEAFTK DQLDMDVGAR
RLGEFSLTDT RFSRIDKFMA HTLFDENFGG PYGNCHVAVG ASYADTYALG AGALDKAKKE
AFGFNDSALH WDLVNTEDKR VTARLKDGST VLIYESGRFA GPEEAS