Gene Dret_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0272 
Symbol 
ID8418076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp335730 
End bp336506 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID645036837 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003197152 
Protein GI258404410 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.544524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGAG ATGTACACCA CCATTTTGAA GTCAGATGGG GCATGGTCAT AGATATTGAC 
AAGTGCACCG GATGCGGTGC CTGTATGGTT GCCTGCGAGG CCGAGAATAA TATTCCACCC
TCCAAGGACT CCTTCGACCG GCTGCGGACC CTGCACTGGC TCATTGTATA CGAACTGTCC
AACGGCAAAT CCTATCCGAA CCACGATACC GCCTATCTGC CGCGGCCGTG CATGCAATGC
GGCAACCCGT CGTGTTCCAC GGTCTGCCCG GTCATTGCCA CGACCAAGGA CGAAGAAGGC
GGCATCGTCA GTCAGATCTA CCCCCGGTGT ATCGGCTGCC GGTACTGCAT GGCGGCCTGT
CCTTACCACT CCCGGGTCTT CAACTGGTAT GATCCGGTCT GGCCCGAGGG CATGGAAAAG
ACCCTGACCC AGAATGTCTC GGTTCGACCG CGCGGGGTGG TCGAAAAATG CACCTTTTGC
CACCACCGTT TTGCGGCGGC CAAGGACAAG GCCCGGGCTG AGGGGCGCGA TCCCCTGCAT
CTCAAGGAAG GGGACTACAA ACCGGCTTGC CTGGAGGCTT GCCCGACCGG GGCGATCACT
TTCGGCGACC TGAACAATCC CGAACATGAA GTCTCCAAAT TGGCCCACAG CAAACACGCC
TTCCGGCTTT TGGAGCGTTT GGGCACTGAA CCGCAAGTGT ACTACCTCAG TCGGCGGGAA
TGGGTCCGTC GCCAGGGAGA CAATTACCTG GAAAACGAAA AGGAGAGGGG GGAGTAG
 
Protein sequence
MSRDVHHHFE VRWGMVIDID KCTGCGACMV ACEAENNIPP SKDSFDRLRT LHWLIVYELS 
NGKSYPNHDT AYLPRPCMQC GNPSCSTVCP VIATTKDEEG GIVSQIYPRC IGCRYCMAAC
PYHSRVFNWY DPVWPEGMEK TLTQNVSVRP RGVVEKCTFC HHRFAAAKDK ARAEGRDPLH
LKEGDYKPAC LEACPTGAIT FGDLNNPEHE VSKLAHSKHA FRLLERLGTE PQVYYLSRRE
WVRRQGDNYL ENEKERGE