Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0272 |
Symbol | |
ID | 8418076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 335730 |
End bp | 336506 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645036837 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_003197152 |
Protein GI | 258404410 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.544524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACGAG ATGTACACCA CCATTTTGAA GTCAGATGGG GCATGGTCAT AGATATTGAC AAGTGCACCG GATGCGGTGC CTGTATGGTT GCCTGCGAGG CCGAGAATAA TATTCCACCC TCCAAGGACT CCTTCGACCG GCTGCGGACC CTGCACTGGC TCATTGTATA CGAACTGTCC AACGGCAAAT CCTATCCGAA CCACGATACC GCCTATCTGC CGCGGCCGTG CATGCAATGC GGCAACCCGT CGTGTTCCAC GGTCTGCCCG GTCATTGCCA CGACCAAGGA CGAAGAAGGC GGCATCGTCA GTCAGATCTA CCCCCGGTGT ATCGGCTGCC GGTACTGCAT GGCGGCCTGT CCTTACCACT CCCGGGTCTT CAACTGGTAT GATCCGGTCT GGCCCGAGGG CATGGAAAAG ACCCTGACCC AGAATGTCTC GGTTCGACCG CGCGGGGTGG TCGAAAAATG CACCTTTTGC CACCACCGTT TTGCGGCGGC CAAGGACAAG GCCCGGGCTG AGGGGCGCGA TCCCCTGCAT CTCAAGGAAG GGGACTACAA ACCGGCTTGC CTGGAGGCTT GCCCGACCGG GGCGATCACT TTCGGCGACC TGAACAATCC CGAACATGAA GTCTCCAAAT TGGCCCACAG CAAACACGCC TTCCGGCTTT TGGAGCGTTT GGGCACTGAA CCGCAAGTGT ACTACCTCAG TCGGCGGGAA TGGGTCCGTC GCCAGGGAGA CAATTACCTG GAAAACGAAA AGGAGAGGGG GGAGTAG
|
Protein sequence | MSRDVHHHFE VRWGMVIDID KCTGCGACMV ACEAENNIPP SKDSFDRLRT LHWLIVYELS NGKSYPNHDT AYLPRPCMQC GNPSCSTVCP VIATTKDEEG GIVSQIYPRC IGCRYCMAAC PYHSRVFNWY DPVWPEGMEK TLTQNVSVRP RGVVEKCTFC HHRFAAAKDK ARAEGRDPLH LKEGDYKPAC LEACPTGAIT FGDLNNPEHE VSKLAHSKHA FRLLERLGTE PQVYYLSRRE WVRRQGDNYL ENEKERGE
|
| |