Gene Dret_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0268 
Symbol 
ID8418072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp330945 
End bp331181 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content57% 
IMG OID645036833 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_003197148 
Protein GI258404406 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.123557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTTGG CAGTGCCGGT CCGCATTGAA TCCATTGAGA ATGAGATGGC TGTGTGTAGC 
GTGGGGGAAA GCGGCACAAC GCTCAAGGCA TCGCTGATGC TTTTGGAGGA GGAACCGCAG
ATAGGCGATT ATGTCATCGT CCACGCCGGA TTCGCGTTGC GCATCCTGGA TCCCCAGGAA
GCCCAGGAGA GCTTGCAGAT TCTGCGAGAA ATGGCCCAGG TGGGACAGGT CGTCTAG
 
Protein sequence
MCLAVPVRIE SIENEMAVCS VGESGTTLKA SLMLLEEEPQ IGDYVIVHAG FALRILDPQE 
AQESLQILRE MAQVGQVV