Gene Dret_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0267 
Symbol 
ID8418071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp330432 
End bp330929 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content58% 
IMG OID645036832 
Producthydrogenase expression/formation protein 
Protein accessionYP_003197147 
Protein GI258404405 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.312911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG AGACACAGCG GATCCTGGTT CTTGGGGTCG GCAATATTTT GTTTACGGAC 
GAGGGTATCG GAGTCCGGGC CATCGAGGAA ATGCAGTCCG GATATCAGTT TTCCGAGAAC
GTGACCCTTA TGGACGGCGG GACGCTGGGG ACGCGACTCA TGGACTACAT TATGGAAAGC
GACTACCTCA TTGTTGTCGA CGCCGTGCTG GGCGACAGCG ACCCAGGCTC GGTCTACCGT
TTGACCGGAG AGGACCTGCG CCAGAGTCTG GCCTTCAAGA ATTCCATGCA CCAGACCGAC
CTGGTGGACA CCCTGGTCTA TTGTGATCTG GCCGGGCATT GTCCTGAAGC GGTGGTCATC
GGTATGGAAC CAGCCGATTA TGAAACGATG GCAGTGGGCC TTTCAGAGCC CGCCCAGGCG
GCATTGCCGC ATATGATGCA GCGGGTGGCC GAGGAGATCC GGAAGGCCGG AGCGACCGCT
GAACCCGTGA GCCAATAA
 
Protein sequence
MSIETQRILV LGVGNILFTD EGIGVRAIEE MQSGYQFSEN VTLMDGGTLG TRLMDYIMES 
DYLIVVDAVL GDSDPGSVYR LTGEDLRQSL AFKNSMHQTD LVDTLVYCDL AGHCPEAVVI
GMEPADYETM AVGLSEPAQA ALPHMMQRVA EEIRKAGATA EPVSQ