Gene Dret_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0263 
Symbol 
ID8418067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp324962 
End bp325531 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID645036828 
Productisochorismatase hydrolase 
Protein accessionYP_003197143 
Protein GI258404401 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC TGATCATCAT CGATATGCAG GAAGACTTTG TCCTGCCCCA CGGCAGCCTC 
TGCATTCAGG GAGCGAAGGA CACCGTACCC CGCATCCGGG AGGTCCTGGA CGGTTTCCGC
CAGCGGGCCC TGCCGATCTT CCACGTGGTG CGTTCCTATC GCGCTGACGG CGTGGATGTC
GAATGGCCCC GGGAGCAGGC CTTTCGCAAG GGACACCATG CGGTTGTTCC CGGGACGCCC
GGCGCGCGCA TTGTCTCCGA GCTCGCTCCC CGGCCCAATG AATACGTGGT GACCAAAAAA
CGGTTCAGTG CGTTCATGCA TACGGAACTC GACCTGCTTT TGCGGCGGCT GCATATCCGT
GAGCTTGCGG TCTGCGGCAC CCAACTCCCG GTCTGCGTTC GGTGCTCGGT CTTCGATGCC
ATCGCCCTGG ATTACCGGGT GACGCTTATT GCCGATGGCA CCTCGGCACA AACAGAGGCC
ATTGCCGAGG CCAATCGGTT CGATATGGCC AATATCGGAA CCCGCTGCCT GAACGCGGCC
GACTATCTGA GCCAGTTGGC TGGTGCCTGA
 
Protein sequence
MPALIIIDMQ EDFVLPHGSL CIQGAKDTVP RIREVLDGFR QRALPIFHVV RSYRADGVDV 
EWPREQAFRK GHHAVVPGTP GARIVSELAP RPNEYVVTKK RFSAFMHTEL DLLLRRLHIR
ELAVCGTQLP VCVRCSVFDA IALDYRVTLI ADGTSAQTEA IAEANRFDMA NIGTRCLNAA
DYLSQLAGA