Gene Dret_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0256 
Symbol 
ID8418060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp319289 
End bp319837 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content62% 
IMG OID645036821 
ProductMethyltransferase type 12 
Protein accessionYP_003197136 
Protein GI258404394 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG ACCGCACCCG CTGGAACGAC AGATACCGCA ACAACCCGCC GCCGGAGCGG 
GTTTGCGCCT TGCTTCCAGA CCATGTTCCC GATGGGGAAG GCAAGACCGC TCTCGACCTG
GCCGGCGGGA CGGGGGCCAA TGCTGCCTTC CTGGCCGACA AAGGCTACCA GGTATACAGC
GTGGATATTG CCGATGCGGC CATACAGCGC TTGCAGGAGC GAGGCCACCC CCGAATCCAT
CCGGTCCAGG CCGATCTCGA CACCTACCGC CCCCCAGCCG AACGCTTCGA CCTCGTGCTC
ACCGTTCGAT TTCTGGATCG ACGGCTCTTT CCCTACCTTG CCGAGGCCCT CGTGCCCGGC
GGTGTCCTTC TCATTCACAC CCTTTTGGAC GACCCTCGCC GGGACTGTCC CCAAATGACC
TCGAATCGCG ACCACCTCCT GCGCCCCAAC GAATTAGTGC GCTCTTTCAG CAACTTGCGC
ATTGTGTTCT ATCGGGAACA TTTCTCCGAC ACCGAGTGCC TCGCCTCGCT GGTCGCCTAT
CGGGACTAA
 
Protein sequence
MDKDRTRWND RYRNNPPPER VCALLPDHVP DGEGKTALDL AGGTGANAAF LADKGYQVYS 
VDIADAAIQR LQERGHPRIH PVQADLDTYR PPAERFDLVL TVRFLDRRLF PYLAEALVPG
GVLLIHTLLD DPRRDCPQMT SNRDHLLRPN ELVRSFSNLR IVFYREHFSD TECLASLVAY
RD