| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0254 |
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| Symbol | |
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| ID | 8418058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 317658 |
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| End bp | 318482 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645036819 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_003197134 |
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| Protein GI | 258404392 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAT TGCCAGAAGT GGAAACCATC GCCCGGGGGC TCGATGCGGC TCTCACGGGG
CAGCATATCG CCAGCGTGCA TCTGCGCCGT GATGCGGTCG CCTGCGGTGA TGCACAGCGG
ATACGCGAGG ATGTCCCGGG GCGGTGTATC AAGCGGGTCT GGCGGCGGGC GAAATTGCTG
CTTGTGGATT GTGTTCCCGA TCGGCACCTG GTCTTCCATC TCAAAATGAG CGGCAAGCTC
CTGCTCGGCG GTCCCCTTGC CGGACAGGAA AAGCACGTCC AGGCCTGGTT CGGGCTGCAA
AGCGGCGAAT CCTTTGTCTT TCAGGATGTC CGCAAGTTTG GGTATATCCG GCTCTTTGAC
GGGGCTGAAC TCGCCAAGTG GCCGTTTTTC GCCAGTCTGG GCCCGGAACC TTTCGACCTC
GACGGCCCCG GCTTTGCCCG GATCCTGTCC GGACGCCGGG CGCGGATCAA GAGTCTGCTG
CTCGACCAGA CGGTCATCGC CGGGATCGGC AATATTTACG CCGATGAAGC GTTGTTTCGC
GCCGGCATCC ACCCCGCTAC ACCGGCGGAT CGCCTTTCCC CGGGAGCCCT GAATCGTTTG
GTCTACGCCC TGCATGCGGC CCTGAATAAG GGATTCGCTT CGGGCGGCTC CTCGCTGCGC
GATTACGTCG ACGCCCTGGG CAAGCGGGGC TCCCACCAGA ATGAATTCCA GGTCTACGGG
CGATGCGGTG CATCATGTCC CTGTTGCGGT CGCTGTCTGG AGCGAACCAC CGTGGCCGGC
AGGACCTCGA CCTTTTGCCC CCGGTGTCAA CCCCTTTCTG ACTAA
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| Protein sequence | MPELPEVETI ARGLDAALTG QHIASVHLRR DAVACGDAQR IREDVPGRCI KRVWRRAKLL
LVDCVPDRHL VFHLKMSGKL LLGGPLAGQE KHVQAWFGLQ SGESFVFQDV RKFGYIRLFD
GAELAKWPFF ASLGPEPFDL DGPGFARILS GRRARIKSLL LDQTVIAGIG NIYADEALFR
AGIHPATPAD RLSPGALNRL VYALHAALNK GFASGGSSLR DYVDALGKRG SHQNEFQVYG
RCGASCPCCG RCLERTTVAG RTSTFCPRCQ PLSD
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