Gene Dret_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0250 
Symbol 
ID8418054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp310847 
End bp312124 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID645036815 
Producthypothetical protein 
Protein accessionYP_003197130 
Protein GI258404388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA ACCTAGCCGC CAGGAGCGGA AAGTCAACCA TCGCCTTGTT CTGGGGCCAT 
TCCCAATTGT GGGGAACGCT TTTATGGCGC GGACTCAACG AACTCGGTGC CGAGGTCCTG
GTTCTCAGAG GCCGTGACAT CGCCCGGGGA GCACTGCAAC ACCACGCCCC GGCCGCTCTG
ATCGTTCCGG GAGGCTGGGC CAAGCAGCGG GCGCTTCATC TTGGTACCGA GGGCAGGGAA
GCCATCCGCG AGTATCTTCG CCACGGAGGG ATGTATGTCG GCTTCTGTGG CGGAGCCGGC
ATGGCTCTCA ATGCAGAGAA TACCGCCGAG AGCCTTCACC TCTGTCCCTG TGGCCGGAAA
CCGATCGCCG ATCGCTTGGT CAATTGCAGC GGACACATGG CGCTGGAGTT GGCAACGGAC
CATCCATTGT GCCCCCCCGA AGACCAGGCC CCGTTGACGG CTCCAGTCTG GTGGCCATCG
CAATTCGACG TCCCTGACCG CGCAGAATTG ACGGTCCTGG CTCGCTATCA AGCCCCCCAG
GAAGACTTCT GGGTCGCTGA CCTTCCCTAT CGGGACATCC CTGACGCCCA TCTCCCTGCC
TGGGAAGACC TTTACGGCAT CAACCTCAAC GCTGACATCC TGCGCGGTGA ACCGGCGGTG
TTGACCGGAC GAGTGGGCGC GGGCCGGTAT ATCATCAGTT ATCTGCATCT GGAAACGCCC
GGCTCCCCGC AGGCCAACCG GTGGCTCGGT CATATTCTTT CTTGGGCCAC GGGGCAAGCC
TTGGGCTCAG AGATCCCCGA ATGGGAGCCC TCCTCCCTTC CACGGCAATG GGACGACGCC
ACGCTCCACG CCTTTCTACC CCTGCTGGAG GATTGTCTCT CCCTGGGACA GCGCCACTTC
CTGCTCAACT GGCGCCGCCC ATGGCTTTTA GGCTGGCGCC GCGGTCTGCC GGGGTTCCAT
CTGTCCACCC TGCACGGTCT GGCCCATCAG ATTCAGGCCC TCCCTCCAAC GCCTCAAGCG
CTTCGATACT GGGCCTTTGC GGCTCCCCGT TTCCACCGCC TCTCCTTGCG CTTTCGAGAT
CTCATGCGCT CCTACCTCCT GATGGAGCGT TATGCTGCCA CGGCCCACGC CGGACGGTCG
ACTCCCATCC GCAGCGGCTG TGAGGAGGCG CAGGCTGTGC GCGAAAAGCT CATCGGCCCG
TTCCCCGGGC AAGGCGGCAT TTGCGGTGAA CTCACCACTG TTTTGGAAAA TCTTTTGTAC
TATTGCCTGA ATCCGTGA
 
Protein sequence
MAENLAARSG KSTIALFWGH SQLWGTLLWR GLNELGAEVL VLRGRDIARG ALQHHAPAAL 
IVPGGWAKQR ALHLGTEGRE AIREYLRHGG MYVGFCGGAG MALNAENTAE SLHLCPCGRK
PIADRLVNCS GHMALELATD HPLCPPEDQA PLTAPVWWPS QFDVPDRAEL TVLARYQAPQ
EDFWVADLPY RDIPDAHLPA WEDLYGINLN ADILRGEPAV LTGRVGAGRY IISYLHLETP
GSPQANRWLG HILSWATGQA LGSEIPEWEP SSLPRQWDDA TLHAFLPLLE DCLSLGQRHF
LLNWRRPWLL GWRRGLPGFH LSTLHGLAHQ IQALPPTPQA LRYWAFAAPR FHRLSLRFRD
LMRSYLLMER YAATAHAGRS TPIRSGCEEA QAVREKLIGP FPGQGGICGE LTTVLENLLY
YCLNP