Gene Dret_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0247 
Symbol 
ID8418051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp307756 
End bp309147 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content59% 
IMG OID645036812 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_003197127 
Protein GI258404385 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCTGC ACATGCCACG TCTGATCCTG GCCGGTTTGT CCGGGGGATC GGGCAAAACA 
ATTCTGACTC TCGGCCTGTG CCGGCATTTC GCCCAGAACG GGTTTGTCGT GAAGCCCTTT
AAAAAGGGTC CGGATTATAT TGACGCCTCT TGGATGGCCT TGGCAGCCAA TCGGAGTGCG
TCGAATCTGG ACCCTTTTCT TATGGACGCC AGCCTGATCC GATCGCTTTT TGCAGACGCC
TCCCAAGGGG CGGATATGGC GGTGATCGAG GGCAACCGGG GGCTTTTTGA CGGCAAAGAT
ATTGAAGGAT CCTGTTCCAC GGCGGAATTG GCCAAGACCC TCCGTGCCCC AGTGATTCTG
GTTGTGGACT GCACCAAAAT GACCCGGACC ACGGCAGCTC TGGTGCAGGG GTGCCATGAT
TTCGACCCAG AGGTGTTCCT TGCCGGAGTG GTCCTGAACA GGACTGCCGG ACAACGCCAC
CGTCGCATTG CTCGCGAGAG CGTCGAGCGC TATACTGATG TCCCGGTGTT GGGAACGTTG
CCCAAGCTGC GCGAGAATCC CATCCCTGAG CGGCACATGG GGTTGGTCTC TGACCAGGAA
TATGAGGCAG ACGGGCCCTT GGAAGAACTT GGCCGGACAA TTGCTGATTG GGTCGATGTC
GAGCGCATCA GGGATATCGC CAGCTCAACG CCGGAGTTGC CGGTGGATAC CGGCGTTTTG
TGGCCCGAAG CGGTCACGCG GGAGACCGTG CGCATCGGCG TGGTCCGCGA TGCAGCGCTG
TGGTTTTATT ACCAGGAAAA TATCAAGGCC CTGGAGCATG CCGGTGCGGA AATTGTCCAC
ATCAGTCTGC TTGATGATGC GGACTGGCCC GAGCTCCACG GTCTTTATCT CGGTGGCGGC
TTCCCTGAAA CGCTGGCCCC GCGCCTCAGC GCCCAGGAAG GGATCCGGCA GCGCGTTGGT
GACCTGGCCC GGAGCGGGCT GCCCATCTAC GCCGAATGCG GCGGTTTGAT GTATTTGTGT
CAGGAACTGG CGTACGAAGG CACAGTCTAT CCCATGGCTG GGCTCTTCCC GGTCCGTGCC
GAAATGGGGC GAAAACCCCA GGGGCATGGT TACACCAAGG CCCGGGTGGT TCTGCCCAAC
CCGTATCACC CCCAGGGCGC GGAAATCCCT GGTCACGAGT TCCACTATTC TCAATGCCAT
ACCTTGCGCG GTGAGACCCC ACCGCTGGCC TTCTTCATGG AACGGGGATG CGGAATCCAG
GAAGGCTTCG ACGGTTTCGT CTTTCAAAAT ACTCTGGCTT GCTATACCCA TCTCCATGCC
CTGAGTTCCC CCCATTGGGC CCCGAATTTC GTGTCCGCCG CCCTGGCCTA TAAAACCTCC
CTCCATGGTT GA
 
Protein sequence
MSLHMPRLIL AGLSGGSGKT ILTLGLCRHF AQNGFVVKPF KKGPDYIDAS WMALAANRSA 
SNLDPFLMDA SLIRSLFADA SQGADMAVIE GNRGLFDGKD IEGSCSTAEL AKTLRAPVIL
VVDCTKMTRT TAALVQGCHD FDPEVFLAGV VLNRTAGQRH RRIARESVER YTDVPVLGTL
PKLRENPIPE RHMGLVSDQE YEADGPLEEL GRTIADWVDV ERIRDIASST PELPVDTGVL
WPEAVTRETV RIGVVRDAAL WFYYQENIKA LEHAGAEIVH ISLLDDADWP ELHGLYLGGG
FPETLAPRLS AQEGIRQRVG DLARSGLPIY AECGGLMYLC QELAYEGTVY PMAGLFPVRA
EMGRKPQGHG YTKARVVLPN PYHPQGAEIP GHEFHYSQCH TLRGETPPLA FFMERGCGIQ
EGFDGFVFQN TLACYTHLHA LSSPHWAPNF VSAALAYKTS LHG