Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0236 |
Symbol | |
ID | 8418040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 298064 |
End bp | 299668 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645036801 |
Product | 4Fe-4S ferredoxin, iron-sulfur binding |
Protein accession | YP_003197116 |
Protein GI | 258404374 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.942909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGC TTCCGAAGCC CGAACACTTG GCGGATATCA ACCATACCCC GCCGCGCCGC AATTGGATGG ATATACCGGC TGAGTTCCGT CCCGGGACCT GGTGTTATCC CGCTGCTCCC AAGAATTTGA AATATCTCGG CTTCCCGAAT CCCCGGGAAT GGTCGCCCTT GGATGACGAC TGGAAACTGC CCGAAAACTG GCAGGAAATC GTCCATCAGG GATTCCGTGA ACGGCTGGAC AAATACCGCT CGCTCAAGGT GTTCATGGAC ACCTGCGTTC GTTGCGGGGC GTGTGCGGAT AAATGCCACT TTTTTGTCGG CGGCGGCGAC CCCAAGAACA TGCCGGTCCT GCGTGCCGAG CTGTTGCGCT CGGTATATCG CAAGGACTTC ACCATGGCCG GCAAGATCAT GAGCAAATTG ACCGGCTCGC GCGTTTTGAC CGAAGATGTG CTTAAAGAGT GGTTCCTGTA TTTTTATCAA TGCACGGAAT GCCGGCGTTG TTCCGCCTAT TGCCCCTACG GCATCGATAC CGCCGAGATC ACCATGATGG CCCGCGAACT GCTGCATCTG GTGGGCATCA ACATCAACTG GATCATGGAA CCGGCTGCCA ATTGCAGCCG CACCGGCAAC CACCTCGGCA TCCCCCCGCA TACGTTCAAG GATATCGTCG ACTTCATGGT CGAGGACATC GAAGACATTA CCGGCGTGAA GATCGACCCG CCCATCAATA AAAAGGGCGC GGACATCCTG TTTATCACCC CGTCCGGCGA CGTTTTTGCC GATCCGGGGA CCTATACCTT CATGGGCTAT CTGATGCTCT TCCACGAGCT GGGGCTCAAC TACACCTTGA GCACCTATGC CTCTGAAGGC GGGAACTTCG GCCTGTTCAC CTCCCATGAA ATGATAAAGC GCCTCAACGC CAAGATGTAC GCTGAAGCCA AACGGCTGGG CGTCAAATGG ATCCTCGGCG GCGAGTGCGG TCACATGTGG CGGGTGATCA ACCAGTACAT GGACACCATG AACGGTCCGG CTGATTTTCT GGAAGTGCCG CGTAACCCGA TCACCGGGAC GGTCTTTCAC AATGCCCGTT CGACCAAAAT GGTCCATATC ACGGAGTTTA CGGCCGACCT GTTGCAGCAC AACGCCCTGA ACCTGGACCC GAGCCGCAAC GACCATCTCA AGGTGACCTA CCACGACTCC TGCAACCCGG CCCGAGCCAT GGGGCTCCTC GAAGAGCCGC GTCAGGTGAT CAAAGGGGTC TGCAACAACT TCTACGAAAT GCCGGACAAT ACCATCCGCG AGCAGACTTA TTGCTGCGGC GGCGGCGCCG GCCTGAACAC CGACGAATTC ATGGAAATGC GTATGCGCGG CGGTATGCCC CGGGCCAATG CCGTCCAGCA CGTCCATGAC AAGTATGGTG TGAACATGTT GTCCTGTGTT TGCGCCATCG ATCGGGCGAC CCTGCCCCCG TTGATGGAGT ACTGGGTGCC CGAGGTGGGC GTGACCGGGG TCCACGAACT CGTGGGCAAC GCCCTGGTCA TGAAGGGCGA AAAGAAGCGT GAGCTCGATC TGCGTGGCGA AGAGCTGCCG GAGAAGGAGG GCTAG
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Protein sequence | MSELPKPEHL ADINHTPPRR NWMDIPAEFR PGTWCYPAAP KNLKYLGFPN PREWSPLDDD WKLPENWQEI VHQGFRERLD KYRSLKVFMD TCVRCGACAD KCHFFVGGGD PKNMPVLRAE LLRSVYRKDF TMAGKIMSKL TGSRVLTEDV LKEWFLYFYQ CTECRRCSAY CPYGIDTAEI TMMARELLHL VGININWIME PAANCSRTGN HLGIPPHTFK DIVDFMVEDI EDITGVKIDP PINKKGADIL FITPSGDVFA DPGTYTFMGY LMLFHELGLN YTLSTYASEG GNFGLFTSHE MIKRLNAKMY AEAKRLGVKW ILGGECGHMW RVINQYMDTM NGPADFLEVP RNPITGTVFH NARSTKMVHI TEFTADLLQH NALNLDPSRN DHLKVTYHDS CNPARAMGLL EEPRQVIKGV CNNFYEMPDN TIREQTYCCG GGAGLNTDEF MEMRMRGGMP RANAVQHVHD KYGVNMLSCV CAIDRATLPP LMEYWVPEVG VTGVHELVGN ALVMKGEKKR ELDLRGEELP EKEG
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