| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0228 |
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| Symbol | |
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| ID | 8418032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 286705 |
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| End bp | 287649 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645036793 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_003197108 |
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| Protein GI | 258404366 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0990439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCACGT TTCGTAACGC AATGTCGATA ATGACTTTTA TTTTGGTCCT CTGTCTGGGA
GCTTTCGCCG GGTGCGATAC GGAAGATTCC CCTGTGCACG TGGATTGGGA CAAACGTGAA
GAGCTCCGTC TAGAGCCCCA GCGGGAGGCG CTGACCTACG CCTATTTGCC CCAATACTCG
CATACGGTGT CCTACCAGCG GCACAACAAA TTGGTGGAGT ATCTCCGCCG GACCACCGGC
CTGCCGATTC GTCAAGTCTA TCCCGACACC TTTGACGAAC ACATCCACAT GGTCGCTCAG
GGCAAGATCG ATATCTCGTT TTCCAATCCC ATGGTCTACG CCAAGATCGC CGAACAATTC
GGGGCGAGGG CCTTCGCGCG TATCGTGGAG CCCAACGGCC GGGCCCAGTT CCGGGGGCAG
ATCATCTGTC GCAGGGACAA CAAGGCCATC ACCTCCCTCG CCGATTGCCG GGGCAAGAGT
TGGATCGCGG TGGATCCGTA TTCGGCTGGC GGGTATCTTT TTGATCTCGG CGTCTTTCTC
GAGCACGGCC TGACGCGAGA GGATTTTTCC GAAATCGCCT TCGCCCCCGG TCCGGGCGGC
AAACAGGAGA AAGTGGCCCT GGCGGTCTTT GCGGGCCGCT ACGATATCGG GTCGATACGT
GAAGGGACCC TGGACATTGT CAAGGACACC ATCGACGTCG ATCAGCTCCG GATCCTGGCC
CACACCCCGT GGTACCCCGG CTGGGTCTAT GCGGCGCGCA AGGGGCTACC GGACAAGACC
ATCGCCAAAA TCCGGCAGGC CCTGCTGGAT CTGGACCTGG CCCACCCGCG GGACCAGGAA
ATTTTGGACA GGGCGGGGTT CAAGGCCATT ATTCCCTCGA GCGACGCCGA TTACGAACCG
GTGCGTGCGT TGATGCGCAC TATTGGAGTG GAAGGTGATG CTTAG
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| Protein sequence | MRTFRNAMSI MTFILVLCLG AFAGCDTEDS PVHVDWDKRE ELRLEPQREA LTYAYLPQYS
HTVSYQRHNK LVEYLRRTTG LPIRQVYPDT FDEHIHMVAQ GKIDISFSNP MVYAKIAEQF
GARAFARIVE PNGRAQFRGQ IICRRDNKAI TSLADCRGKS WIAVDPYSAG GYLFDLGVFL
EHGLTREDFS EIAFAPGPGG KQEKVALAVF AGRYDIGSIR EGTLDIVKDT IDVDQLRILA
HTPWYPGWVY AARKGLPDKT IAKIRQALLD LDLAHPRDQE ILDRAGFKAI IPSSDADYEP
VRALMRTIGV EGDA
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