Gene Dret_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0219 
Symbol 
ID8418023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp274372 
End bp275535 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content60% 
IMG OID645036784 
Producthypothetical protein 
Protein accessionYP_003197099 
Protein GI258404357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.760855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.763864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCG GCGTCCTTTT TCAGGCCCTC GTGCTGCTCT TGCTGTGCAC TCCAGCCCTT 
GCTCAACGCC AATGCCCCTC CGAACCCGTC ATGGCGGCGG TGGAAGCGTT TGTTCAGGCC
GCTGAGGGCA CACAGGACCC CACGCCGGCC CAGCGCGACG TGTTGACCAG CTTGGCCTCC
CGGCGCGACG CGGCCTGCAG CGGTGATCCG GTCCAATTTC AGGGGATGCC CGGGGCCTTT
CACGCCTTTG ATGTCGACGT CGACCTGCAG ACCATTTTGG AGACCCTCTA CCACCCGGAT
ATCCCCTCAA ACATGATCAT CCCCTCCTCG GTGCGCTGCA CCAAATGGCT CGAAGTGGCG
GGAGAGAACG CCACAGAGGT GCCCCCTTTG GCGCCGGCGC TCTCCCGACC AAACGCGACC
CGGATCATCC GGGGCGTGGA GCAGGAGACC AATACGCCGG ATCTGTTTAC GGGATCCTAT
TACACCTACC AACAGCATCG GCTGCTTGTG CTTTCCAACG CGGCGCAGGG TCAACCAGTG
CTCATCTCCG TGGCCGCCCA GCAGGATATT TCCGAAGTTG GCCACAAAGG CCGGGTCATT
GGAGACGACA CCTTGTGGAC CTATTATTAT TCCGGAGAAA AAGGGGTGAA CAAGATAGGG
CTGGGATGGG TGGACAGCCA TATCTTTGAC GGGGTTTCAA TCACCCTCTA CAGCCAGGTT
CCCGACTCCA GGCAAACACG GGTGACGACC ATGAAATGGT TGAATGCGGG CTGGATGGGC
ATGAATATGG TCAAACCGAA GCATATCCAG GCCGGATTGG AACGGTTCGC CGCAGGGTTG
ACCCGGGTCC TGGAATCGCC ACAGTTCCCT GCTCCGGACC ATTTAGCTCA GGTGGGGCGC
TGGCTTGAAC GCCAACCGCG GCAGCAATTG GCACAATGGC GGGCCGCCTT GGCCCAAAGC
CGCCCGGAGG CACCATTTCC CACGGATTGT GAGGAACTCA CCATGGCCTG CGACGTAAAG
TACGCCCGGT CCATGAGCCA CAACTCGCTT GTCTGCGCCG TGGGGCTGGA ATTCATGAAG
TGGCGGCTCG GCCTGTCCTC CGCCCCCGCT GATGAGATCT GCCGGCAGAT CTTCGCTCCA
GTTTTGCAAA ACCCAAAAGG ATAG
 
Protein sequence
MKGGVLFQAL VLLLLCTPAL AQRQCPSEPV MAAVEAFVQA AEGTQDPTPA QRDVLTSLAS 
RRDAACSGDP VQFQGMPGAF HAFDVDVDLQ TILETLYHPD IPSNMIIPSS VRCTKWLEVA
GENATEVPPL APALSRPNAT RIIRGVEQET NTPDLFTGSY YTYQQHRLLV LSNAAQGQPV
LISVAAQQDI SEVGHKGRVI GDDTLWTYYY SGEKGVNKIG LGWVDSHIFD GVSITLYSQV
PDSRQTRVTT MKWLNAGWMG MNMVKPKHIQ AGLERFAAGL TRVLESPQFP APDHLAQVGR
WLERQPRQQL AQWRAALAQS RPEAPFPTDC EELTMACDVK YARSMSHNSL VCAVGLEFMK
WRLGLSSAPA DEICRQIFAP VLQNPKG