| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0217 |
|---|
| Symbol | |
|---|
| ID | 8418021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 272471 |
|---|
| End bp | 273442 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645036782 |
|---|
| Product | class II aldolase/adducin family protein |
|---|
| Protein accession | YP_003197097 |
|---|
| Protein GI | 258404355 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.311562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGT ATTCTTTGGA ACCGGTCGCC GTCGTCCGTA CGGTATACCC GTCCCGGGAG
GCATGTCCCC GTCAAGCCGG AAGTGATGCC GAGCCGGCCC GGATCGAAGT GGCATCGGAA
TTTCAGCCAG CCCTGGATGG TGTTCGCCCC GGGCAGCACC TGCTGGTGTT GACCTGGCTG
GAGCAGGGCG ACAGGGCCTG CCTGCGGTGT CACCCCCGGG GGGATGTCAA CCGTCCCCAG
CGCGGGGTTT TTACCACCCG TTCACCGGAC CGCCCCAACC CCATCGGGCT CCACGAAGTA
CGCGTTTTGG GCTGGGAGAA CGGGGTGCTG ACCGTTTCCG GCATGGAGGT GGTCGACGGG
ACCGCCGTTG TGGACATCAA GTCCGTCCCG GGCGCAGCTG CCGATAGTGC GGTGGGGATC
TTGAAACAGG CCGGGCACCG GTGTTGGCAG CGAGGGCTGA GCAACGGGTT GAGCGGCAAT
CTGAGTCTGC GTTGCGAAAA CGGGATGTAT ATCACCCGGT CCGGATGCGG AAAAGGACAC
TTGTCGACCA GGGATATTGT CGGGCTTGAC GAGCAGGGGG ACAGTTTTTG GGGACAGGGG
CGTCCTTCCT CGGAATGGCG GGTCCACCAC GCCATCTATC GTGCGCAACC GCGTGCCAGG
GCCATAGTCC ACGTCCACCC GCCGTGCGTG TTGGCTTTGT CCTTGGGCGA AGACATCCGG
CGAGCTTTTG CGGCGCTGCC CTTATATGAG AGTCAGGTGG TGCTGGATCA GCTCGCCGTT
GTGCCCGCCT TCGATCCCGG GAGCACGGCG CTGGCCACAG CAGCCGGAGA GGCCGCCCAA
GGGGCGGGGG CGATCTTTTT GACCCGCCAC GGCGTCGTCT GCTGGTCAGA GGAGATGGAT
CAGGCCCTGG CTTTGGCGGA GGAGGTGGAG ACCCTGGCCC GGATCAGGCT CGAGGCGGGG
CGCAGGTCCT GA
|
|---|
| Protein sequence | MAAYSLEPVA VVRTVYPSRE ACPRQAGSDA EPARIEVASE FQPALDGVRP GQHLLVLTWL
EQGDRACLRC HPRGDVNRPQ RGVFTTRSPD RPNPIGLHEV RVLGWENGVL TVSGMEVVDG
TAVVDIKSVP GAAADSAVGI LKQAGHRCWQ RGLSNGLSGN LSLRCENGMY ITRSGCGKGH
LSTRDIVGLD EQGDSFWGQG RPSSEWRVHH AIYRAQPRAR AIVHVHPPCV LALSLGEDIR
RAFAALPLYE SQVVLDQLAV VPAFDPGSTA LATAAGEAAQ GAGAIFLTRH GVVCWSEEMD
QALALAEEVE TLARIRLEAG RRS
|
|---|
| |