Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0216 |
Symbol | |
ID | 8418020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 271242 |
End bp | 272306 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645036781 |
Product | basic membrane lipoprotein |
Protein accession | YP_003197096 |
Protein GI | 258404354 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.518023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACAAA TCAGCATTCT TTGCGCCCTG ATGGCCGCCT TTTTGCTCTG TCTGCCCGGC GCCGCGTCGG CTGAGGATCT CAAGGTCGGT TTTATCTATG TTTCCCCCGT GGGGGACGCT GGCTATTCCT ACGCCCACGA CCTCGGACGC CAGGCTGTGG AACAAATGGA CGGAGTGACC ACCTCCTATG TGGAAGCCGT TCCGGAAGGA CCGGACGCCG AACGGGTCCT GCTGAATATG AGCCGGAAAG ATTTCGATCT CATTTTCGCC ACCAGCTACG GCTACATGGA CTCGGTGATC AAGGTCGCCA AACGCTTTCC AGAGATAACC TACATGCACT GCTCCGGATT CAAGCGCGCT GAGAATGTCG GCACCTACTT CGGGCGCATG TACCAGGCCC GCTACCTCAC AGGGATGGTC GCCGGCGAAA TGACCGACAG TAATGTTCTC GGCTACGTGG CCGCCTACCC CATTCCGGAA CTGATCCGGG GCATCAATGC CTTCACGCTT GGGGCCCAGG CCGTCAATCC CGACGTCAAG GTCCGCGTCG TCTGGACCAA AAGCTGGTAC GATCCGGCCA CGGAAAAAGA AGCCGCGCTG AGTCTGCTCG ATGTCGGCGC CGATGTCATC GCCCAGCACG TGGATTCCCC TGCTCCACAG GAAGCGGCCG CTGAAAAAGG GGCGTATTCC GTGGGCTACA ATTCCAACAT GGCCCAATTC GCTCCCGAAG CGCATCTGAC CTCCGCTGTC TGGAACTGGG ACAATCTCTA TCCAGAAATT GCCGAGCAGG TTGTGCAGGA CACGTGGGAA AGCCAGGATA TCTGGGCTGG TTTGAACGAA GGCATCATCG GTCTGGCCCC CTACGGCCCC ATGGTTCCCG AATCTGTGCA GGCCGAGGTG GAAGAGGCCA AGGCAGCGAT CCAGAACGAT GAGCTGACTG TTTTCGCCGG TCCGCTTAAG GACCAGGACG GTACCGTCAA AGTGCCCGAG GGCGACTCCA TGACCGATGA GGAAATGCTG GGGATGACCT GGTTTGTCCA AGGGGTCATC GGGACGACCG AATAG
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Protein sequence | MRQISILCAL MAAFLLCLPG AASAEDLKVG FIYVSPVGDA GYSYAHDLGR QAVEQMDGVT TSYVEAVPEG PDAERVLLNM SRKDFDLIFA TSYGYMDSVI KVAKRFPEIT YMHCSGFKRA ENVGTYFGRM YQARYLTGMV AGEMTDSNVL GYVAAYPIPE LIRGINAFTL GAQAVNPDVK VRVVWTKSWY DPATEKEAAL SLLDVGADVI AQHVDSPAPQ EAAAEKGAYS VGYNSNMAQF APEAHLTSAV WNWDNLYPEI AEQVVQDTWE SQDIWAGLNE GIIGLAPYGP MVPESVQAEV EEAKAAIQND ELTVFAGPLK DQDGTVKVPE GDSMTDEEML GMTWFVQGVI GTTE
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