Gene Dret_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0216 
Symbol 
ID8418020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp271242 
End bp272306 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content59% 
IMG OID645036781 
Productbasic membrane lipoprotein 
Protein accessionYP_003197096 
Protein GI258404354 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.518023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAAA TCAGCATTCT TTGCGCCCTG ATGGCCGCCT TTTTGCTCTG TCTGCCCGGC 
GCCGCGTCGG CTGAGGATCT CAAGGTCGGT TTTATCTATG TTTCCCCCGT GGGGGACGCT
GGCTATTCCT ACGCCCACGA CCTCGGACGC CAGGCTGTGG AACAAATGGA CGGAGTGACC
ACCTCCTATG TGGAAGCCGT TCCGGAAGGA CCGGACGCCG AACGGGTCCT GCTGAATATG
AGCCGGAAAG ATTTCGATCT CATTTTCGCC ACCAGCTACG GCTACATGGA CTCGGTGATC
AAGGTCGCCA AACGCTTTCC AGAGATAACC TACATGCACT GCTCCGGATT CAAGCGCGCT
GAGAATGTCG GCACCTACTT CGGGCGCATG TACCAGGCCC GCTACCTCAC AGGGATGGTC
GCCGGCGAAA TGACCGACAG TAATGTTCTC GGCTACGTGG CCGCCTACCC CATTCCGGAA
CTGATCCGGG GCATCAATGC CTTCACGCTT GGGGCCCAGG CCGTCAATCC CGACGTCAAG
GTCCGCGTCG TCTGGACCAA AAGCTGGTAC GATCCGGCCA CGGAAAAAGA AGCCGCGCTG
AGTCTGCTCG ATGTCGGCGC CGATGTCATC GCCCAGCACG TGGATTCCCC TGCTCCACAG
GAAGCGGCCG CTGAAAAAGG GGCGTATTCC GTGGGCTACA ATTCCAACAT GGCCCAATTC
GCTCCCGAAG CGCATCTGAC CTCCGCTGTC TGGAACTGGG ACAATCTCTA TCCAGAAATT
GCCGAGCAGG TTGTGCAGGA CACGTGGGAA AGCCAGGATA TCTGGGCTGG TTTGAACGAA
GGCATCATCG GTCTGGCCCC CTACGGCCCC ATGGTTCCCG AATCTGTGCA GGCCGAGGTG
GAAGAGGCCA AGGCAGCGAT CCAGAACGAT GAGCTGACTG TTTTCGCCGG TCCGCTTAAG
GACCAGGACG GTACCGTCAA AGTGCCCGAG GGCGACTCCA TGACCGATGA GGAAATGCTG
GGGATGACCT GGTTTGTCCA AGGGGTCATC GGGACGACCG AATAG
 
Protein sequence
MRQISILCAL MAAFLLCLPG AASAEDLKVG FIYVSPVGDA GYSYAHDLGR QAVEQMDGVT 
TSYVEAVPEG PDAERVLLNM SRKDFDLIFA TSYGYMDSVI KVAKRFPEIT YMHCSGFKRA
ENVGTYFGRM YQARYLTGMV AGEMTDSNVL GYVAAYPIPE LIRGINAFTL GAQAVNPDVK
VRVVWTKSWY DPATEKEAAL SLLDVGADVI AQHVDSPAPQ EAAAEKGAYS VGYNSNMAQF
APEAHLTSAV WNWDNLYPEI AEQVVQDTWE SQDIWAGLNE GIIGLAPYGP MVPESVQAEV
EEAKAAIQND ELTVFAGPLK DQDGTVKVPE GDSMTDEEML GMTWFVQGVI GTTE