| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0214 |
|---|
| Symbol | |
|---|
| ID | 8418018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 269059 |
|---|
| End bp | 269979 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645036779 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003197094 |
|---|
| Protein GI | 258404352 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAT CGATTCTTTT GCCCTTGTTG GCGGCCACGG TCCAGTCCGG CACCCCCATC
CTCTACGCGA CGCTGGGGGA AATCCTGACC GAACGGGCCG GGGTGTTGAA CCTCGGCGTG
GAAGGCATGA TGCTCTTGGG CGCCCTGGCC GCGTTCTGGG CCAGCCTGTC CACCGGCTCG
CCGTGGATCG GCCTGCTGGC CGGAGGCACA GCCGCAGCCT TGCTCAGCGG CCTGCACGCC
CTGGTCTGTC TCGTCTTCCA GGGCAACCAG GTCGTTTCAG GACTCGCCCT GACCATTCTC
GGCACTGGGC TGGCCGATTT CTGGGGCACC CCGTTTATCG GGCGCAAGGC CCCCGGCTTC
GGGACCCTTG AACTTCCTGT CCTGGCCGAC CTCCCCGTCC TGGGCCCTAT CTTTTTCCAG
CAAGACATCC TGGTATACCT CTCCTTGCTG CTGCCTGTGG CCATGTGGCT TTTTCTGGGA
CGGACCCGCT GGGGACTCGG TCTGCGCAGT GTAGGCGAAT ATCCCCGGGC CGCTGCCGCG
GCCGGACTGC CTGTTTTGTG CTACCGGGCG GCCGGGATCA TGGGCGGCGG TTTTCTGGTC
GGTCTGGGCG GAGCGTACCT CTCACTGGCC TATACCCATC TCTGGACCAA CGGCTTGACC
GCCGGACGGG GCTGGATTGC TGTGGCCCTG GTCATTTTCG CGTTCTGGCG GCCCGGACGG
GCGATTGTCG GCGCCTACCT CTTCGGTGGC GTCATGGCCT TCCAACTCCG CCTCCAGGCC
ATGGGCACCA ATCTGCCGTC TTCACTTCTG CTGATGCTGC CCTACGCCCT GACCATCCTC
GTTCTGGCAT TGACCTCCTG GCGAGGCCGT TTCACTGACG CCCCTGGATG GCTGGGGGTG
AATATCGAAC CCGAAGAATA G
|
|---|
| Protein sequence | MNESILLPLL AATVQSGTPI LYATLGEILT ERAGVLNLGV EGMMLLGALA AFWASLSTGS
PWIGLLAGGT AAALLSGLHA LVCLVFQGNQ VVSGLALTIL GTGLADFWGT PFIGRKAPGF
GTLELPVLAD LPVLGPIFFQ QDILVYLSLL LPVAMWLFLG RTRWGLGLRS VGEYPRAAAA
AGLPVLCYRA AGIMGGGFLV GLGGAYLSLA YTHLWTNGLT AGRGWIAVAL VIFAFWRPGR
AIVGAYLFGG VMAFQLRLQA MGTNLPSSLL LMLPYALTIL VLALTSWRGR FTDAPGWLGV
NIEPEE
|
|---|
| |