| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0207 |
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| Symbol | |
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| ID | 8418011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 262116 |
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| End bp | 263687 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645036772 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003197087 |
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| Protein GI | 258404345 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACATC CGCTGCCCAG GCCTCGCTTT TTTTCCCCGG GGCTCGATCC TGGAACCTGT
TTGGAACACA GTTCCACGCC CCCGAAAGCC ATTGTGGGGA AACACTTTCT CCCCCTGATC
GCAGCTGTGC TGGGCTGTGC CATCCTCCTG CAGGCATGCA CGAGGCCGGC TGCCATGCCG
CCGGAAACGG CCGCCTCGCC ACCGCAGCGC GTGCAGCAGT TCGCTGTCCC CCCCGCACCG
GCCCCGAACG CCACGACACC TTCCCTCGCC TCCCCTCTCT CCCTGGACGC GGCCTTGCAG
CGGGCCATAG CCGACAACCC CCAGCGCAGA ATCGTTGCTG CGCGTTTGGC ACGGGCCGAG
GCCGTTATCG CCGAGCGACA GGCCGCTTTC TGGCCCCAAG TAAGCCTGTA TACCGAACAC
CTTCAGGGAG AATCTCCGTC GGCTTCCCTT TTTAAAAGTA TCGACCAGCG CCGCCTCGAC
CAGCGGAATG TTGACTTCAA CCGCCCCGGG CGATTTCAAA ATTTTGAAAC CGGCATCAAG
GCCAACCTCC AGGTGTTCAA CGGACGACGC GACACGTTGC GGTTGCAAAT AGCCAAACAC
CGCCGAGCCG CTCTGACCCA CACTCGGGCC GAAGTGATCA ACGATCTCTG CACCGCCGTC
ACCGAGACCT TCTGCACCAT CCTGGCAGCT GAGGAGACCG TGGCCACCTC CAAGCACCGC
GTCACACTCC TGCGGGAGGA GGTCCGGATG GCCAAAATCC GCTTCGAAGC CGGTGGCACC
CTGAAAGCCG ATGTCCTTTC CTTGCAGAGC CGCCTCTCCC AGGCCAAATC GGCCCACACC
CGGGCCCGTG CCAGGGCCTC GTCCGCTCGG GCCGCTCTGG CGGTTTTATT GGACCTGCCA
CCGGACCAAT GCCCGGACAT CACCGGATCA CCCCGACTCC CGGTCCAACT CCCCGCCACC
TACCACAAGG CCAGGACCTA TGCCCTCAAC CACCATCCCG CCTTGACCCG AGCCCGAGAA
CAGACCGAAC AGGCCCGTCT TGGACTGGAC CTGGCCTGGG CCGCGTACCT GCCGCGTCTC
CTCGCCCAGG GAAAATATTA TCACGACGAT CCGCATATGG CCTATTCCCG CGAGCGGGAG
AACTGGACTC TGGGTCTTGT GCTGGACTGG CAGCTTTTTT CAGGCCTGAG CCGGCAGGCC
AAAGTCGAAC AAGCCAGAGG CCGCATGGCC GAGGTCCGGG CCCGAAACCG GCAGACCCGG
CAACGCATCC TGCAAAATCT CAAACAGGAT CTGGCCGAAC GCGAAGCGGC CAGGGACCGG
TTGCAGGCGA GTCGCCACCG GGTAGAACAG GCCAGTGAAG CTCTGCGCCT GGTCCGAATT
CGCTATCAGG GCGGCTCTGC CACATTGACC CGATTTTTAT CCGCCGAACT CGCCCGCTAC
GCCGCCCAAG AAGCCGAGAC AGCCAGCCGG TTCGATCTCC TTCGGATTCA AGCCGCCATA
GCCCGGGATA TCGGCGCGTG GCACCGCCGC TTCGGCTCAT TTGCACCATC GACCGCTCAG
AGCGCCCCCT GA
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| Protein sequence | MSHPLPRPRF FSPGLDPGTC LEHSSTPPKA IVGKHFLPLI AAVLGCAILL QACTRPAAMP
PETAASPPQR VQQFAVPPAP APNATTPSLA SPLSLDAALQ RAIADNPQRR IVAARLARAE
AVIAERQAAF WPQVSLYTEH LQGESPSASL FKSIDQRRLD QRNVDFNRPG RFQNFETGIK
ANLQVFNGRR DTLRLQIAKH RRAALTHTRA EVINDLCTAV TETFCTILAA EETVATSKHR
VTLLREEVRM AKIRFEAGGT LKADVLSLQS RLSQAKSAHT RARARASSAR AALAVLLDLP
PDQCPDITGS PRLPVQLPAT YHKARTYALN HHPALTRARE QTEQARLGLD LAWAAYLPRL
LAQGKYYHDD PHMAYSRERE NWTLGLVLDW QLFSGLSRQA KVEQARGRMA EVRARNRQTR
QRILQNLKQD LAEREAARDR LQASRHRVEQ ASEALRLVRI RYQGGSATLT RFLSAELARY
AAQEAETASR FDLLRIQAAI ARDIGAWHRR FGSFAPSTAQ SAP
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