| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0206 |
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| Symbol | |
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| ID | 8418010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 260939 |
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| End bp | 262099 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645036771 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003197086 |
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| Protein GI | 258404344 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA GAAACCTCCT GTCCACAGCG CTTGGTATCG CGATTCTGGC CGGACTGGTG
CTGTATACCG GCGGCTTTTT CGAGTCCGGC GGCATCAGCC CCGACTCCGT CTCCCGGCCG
CAACCAACGC AAGGGCCAAC GCCATCCCGG ACGGCGACCG CCCATCTGAA AACCATCAGC
CAGACCACCA CAGCCCCGGG AACCGTGGCC CCCCGCACCA CGATGCGGGT TGAAGCCCAG
GTCGCGGCCC AGATCACCTC TATTGCCGTC ACTGCCGGCG ATCGGGTCAG CACAGGCGAG
ACCCTGATAC AGCTGGAGCA CAACCGGTTG GACACGGCGG TAGAACAGGC CCGGCAGCAC
CTGGTCAAGC GCCAGTCCCA ACTCGATCAG GCCCGAGAGA ATCTTCCGGC GGCCCAGGCG
GAGTTCAACG CCACACAGGC CCAATGGCGA CGGATCAAAA CCTATTTCAA GGCCGAAGCC
GCCACAAAAC AGGAATTGGA GCAGGCCCGA GCCGCTTTCC ACCGCGCCCG GTCCCGCCTG
ACCACGGCCC GCAAGCGGAT CGGCCAAGCC GCAGCAGGAG TGGAAGTTGC ACGCCAAAAA
CTGCGGGCCG CACGTATCAA GCGCGGCTAC GCCCGACTCA CTGCTCCGGC CGACGGCCAA
GTCGCCAAAC GGTTGGCAGA CCCGGGCGAC CAGGCCCGGC CAGGCACCCC ATTGCTGGTC
TTGCATACGG ACCGCACCCT GCGGCTTGAG GCCCGCGTTC CGGAGAGCCG TTTGGCCCAT
GTGCGCCAGG GGCACAACGC CACTGTCCAT ATTCCCGCCC TGCCCGCTGC ACTCTCAGGA
ACCATAGAAG AAATCATCCC TTCGGCTGAC CCGCGGACCC GCACCTTCAC CGTCAAAGTT
GCCCTGCCCG ACTACTCCGG CCTCCAGCCT GGGATGTTCG GGCGCCTCGA AGTGGCCTCC
GGAACCCGGC AGGCGGTCTT CGTGCCCGAG GGCGCCGTGC GCCCAATGGG CCAGTTGGAT
ATAGTCCGGG TCAGACAGCA ACAGGGGTGG CAGGACATCC TGGTCACCAC AGGCGTCCAC
CGCGATGAGA TGATCGAGAT CCTCTCCGGA GTCGCTCCCG GTGACGAGAT CGCCCTCGCA
GGAGGCGGCC ATGGCACATG A
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| Protein sequence | MNLRNLLSTA LGIAILAGLV LYTGGFFESG GISPDSVSRP QPTQGPTPSR TATAHLKTIS
QTTTAPGTVA PRTTMRVEAQ VAAQITSIAV TAGDRVSTGE TLIQLEHNRL DTAVEQARQH
LVKRQSQLDQ ARENLPAAQA EFNATQAQWR RIKTYFKAEA ATKQELEQAR AAFHRARSRL
TTARKRIGQA AAGVEVARQK LRAARIKRGY ARLTAPADGQ VAKRLADPGD QARPGTPLLV
LHTDRTLRLE ARVPESRLAH VRQGHNATVH IPALPAALSG TIEEIIPSAD PRTRTFTVKV
ALPDYSGLQP GMFGRLEVAS GTRQAVFVPE GAVRPMGQLD IVRVRQQQGW QDILVTTGVH
RDEMIEILSG VAPGDEIALA GGGHGT
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