| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0205 |
|---|
| Symbol | |
|---|
| ID | 8418009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 257680 |
|---|
| End bp | 260949 |
|---|
| Gene Length | 3270 bp |
|---|
| Protein Length | 1089 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645036770 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_003197085 |
|---|
| Protein GI | 258404343 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATG AGGGGCGGTC CGTTCGCGGC GTCATCCCGA GTATCGTCAA CACCTTCCTC
AACCCTCAAC TCCCGATTCT GCTGATCATT CTCGCCCTCG GGGTAGGACT GACGGCCATT
TTGCTGACCC CCAAGGAAGA GGAGCCGCAA ATCGTGGTCC CTCTGGCCGA CATCGTTGTC
CAGGCCCCGG GAGCCAGCGC GGCTGAAGTG GAAAACCAGG TCGCCACCCC CCTGGAAAAT
CTGCTCTGGC AAATCGAGGG CGTGGAATAT GTCTACTCCA TTTCGCGCAA GGACAGCGCT
GTGGTCACCG TCCGCTTCCA CGTCGGCCAG GACCACGAAC GGGCCATGGT CCGGCTGCAG
AACAAGGTCG GCCGGAATCT GGAACGGGCG CCGGCGCTGG TCAAAAACTG GGTCATCAAA
CCGATTTCCA TCGACGATGT GCCCATTTTG AACCTGACCC TGTATTCCGA GACCTACGAT
GACCACGAAC TCTACCGCAT AGGGCAGGAA ACACTCCACC ATTTGAGCGA AGTGGAAAAC
ATTTCCCGGA CCGAGATTGT GGGCGGTCGG CCGCGGGAAA TCCGTGTCGA ACTCGCGCCG
GACCGTCTGG CCGGATACAA TGTTACTGCC AATCAGATCC ACCAGGCCCT GGCTGCAGCC
GACCACTCCG TACACGCCGG GAGCTTCAAC CAGGCCAACC GGCGCTACAT CCTCAGCGCC
AACAATTTTT TGACCAGCAC CCGCGAGGTT GAACGTCTCG TGGTGGGCGT GCATGAGGAC
AAACCTGTCC TGCTCAGGGA TGTCGCCCGG ATAATGGACG GTCCCCAAGA AGCGTCTGTC
TATAGCCGCA TCAGTTTTTC CCGACTGTAC CGGCAGCGCC AGGTTAATAC TGGCGCACAC
CCGCAAGGCT CGAACGGGAG TTTTCCGGCC GTCACCCTCG CCGTGGGCAA GAAAAAAGGG
ACCAACGCCG TGTGGGTGGC CCGGAACGTC CTGGACAGGC TGGAGGAACT CAAGGATTCA
GTCATTCCCG ACGGGGTGCA TGTCGAAGTC ACCCGCAATT ACGGCCAAAC AGCCCAGACC
AAGGTCAACA ACCTCCTCAG TTCCCTGGGC TTCGCCGTTC TGACCGTCGT GGTCTTGCTG
GCTTTCACCC TGGGGCGTCG CGAAGCACTC ATCGTGGCCC TGGCCGTGCC CATCAGCTTT
GCTCTGGCCT TGTTCGTCAA TTATCTCCTG GGTTACACCA TCAATCGGGT CACCCTGTTT
GCCCTGATCC TCTCCCTGGG CTTGGTCGTC GACGACCCAA TAACCAATGT GGACAACATC
CAGCGCCACA TCCGCATGGG GAAACTGCCT CCCCGCTCAG CAACCCTGGC CGCCGTGCAG
GAGGTATTGC CACCGGTATT GATTTCCACC CTGGCTATTA TCGTCTCGTT TACTCCAATG
TTTTTCATCA CCGGGATGAT GGGCCCATAC ATGGCCCCCA TGGCCGCCAA TGTCCCATTG
ACGGTCATCT TTTCCACTGT CTGCGCTCTA ACCATTGTCC CCTGGCTCGC CTTGACCCTG
TTGCGCCGCG AGCGGTTGAC CCCGGACGAA TCCGGGGCAG GGCAGCAGTC GAGTCCGAGC
AGTGGGACCC CGGCCTGGAT CCACAGCCTG TATCGGAAAA TCTGTTCTCC GTTTCTGGAT
TCACGTCTCA AACGGTGGCT CTTGACTGGT GCGATCGGCC TCGGCCTTGC CGCGGCAGTG
AGTCTGCCCC TTTTGCGCCT GGTACCATTG AAGATGCTCC CCTTTGACAA TAAAAACGAA
TTCCAGCTGG TTTTCGACAT GCCCGAGGGG ACGCCGCTCG AGGCCACGAA CAAGGCGGTC
CTTGCCTTCG AAGACTATTT GCGCCAGGTC CCCGAAGTCA CCTCTGTGGT CGCCACAGTC
GGTGACGCCT CCCCCATCGA TTTCAACGGC ATGGTCCGCC ACTATTATTT ACGCCAAGCA
CCACACCAGG CCGACATCCG GGTCAATCTC GTGGACAAAC CGGACAGGGA GATGCAGAGC
CACGGCATCA CCCTGCGGCT GCGAAACGAT TTGACGAAAC TGGCCCGCCG CCACGGCGTG
GACCTGAAAA TCGTGGAAAT CCCCCCCGGT CCTCCGGTAT TGGCTACAGT GGTCGCCGAA
ATCTATGGCA GTCCCGGCAC CCCCTACGCA AAGATGCTCC AGGGCGCTGC AAACATGACC
TCAATCATGC GCAAGGAGCC GGGAGTGGTG GACATCGACA CCAGTGCCAG CGCTGCGAGA
CCACGGCGGA ATTTTGTCGT GGACAAGGAA AAAGCCGCCT TGCACGCCAT CCCCACCTCT
CGCATCACCC AGACCCTGCG CCTGGCCATG AGCGGAACCA CACCGGCGAC ACTCCATGCC
CCGCGAGAAC GCGCCCCTTT GCTGATTCGC CCCATCTTGC CACGAGCCCA CCGCTCCGAA
CAGACCGCCC TTCTCGACCT GCGCCTGCGC GGCAAGGGCG GTGCCCTTGT GCCTTTGGGG
GAACTCGGCC ATTTCGAACA GGTGGCCGAA GACCAGCCGA TCTATCACAA AAATCTGAAG
CGTGTCGTCT ACGCCCAGGC CGAAACCGCG GGACGTTCGC CGGCCACCGC CATTTTGGAT
ATGCAGTCGC GGCTGGAGCA CAATCCGCTC TCTGCGGATC TCCAGGCCGA ATGGGCAGGT
GAGGGAGAAT GGAAAATCAC ACTGCGCGTT TTTCGGGACC TTGGCCTGGC GAATATCGCC
GCCCTGGCCG GGATCTACAT CCTGTTGAGC ATTCAGACCG GCTCCTTTGC CTTGCCGCTG
CTTATCCTGC TGGCAGTGCC TCTGACCCTG CTGGGCATCA TGCCCGGGTT CTGGCTGCTG
AACATCTTCA CTGCTTCACC GGTGAACGGG TATGCCAACC CGGTTTTTTT CACCGCCACA
GCCATGATCG GCATGATCAC CCTGGGGGGA ATCGTCATTC GCAACGCCGT GGTCCTGATC
GAATTCGTCC ACGAATCCCT GCAGCAAGGG CACGACTTCC GGGAAGCCAT CCTCCAGAGC
GGGGCCATCC GGCTGCGGCC AATTGTCTTG ACCGCCATGA CCACGGCCCT GGGCGCCTGG
CCGATCACCC GGGACCCTAT CTTTTCCGGC CTGGCCTGGG CCCTGATTTT CGGACTTGTG
GCCTCCACCG TCTTTACGCT GCTTATTGTC CCGGTGACCT ATTACGCCCT GTATACATCC
CGTTATTCCC AGGAGAGTGG CCATGAGTGA
|
|---|
| Protein sequence | MAHEGRSVRG VIPSIVNTFL NPQLPILLII LALGVGLTAI LLTPKEEEPQ IVVPLADIVV
QAPGASAAEV ENQVATPLEN LLWQIEGVEY VYSISRKDSA VVTVRFHVGQ DHERAMVRLQ
NKVGRNLERA PALVKNWVIK PISIDDVPIL NLTLYSETYD DHELYRIGQE TLHHLSEVEN
ISRTEIVGGR PREIRVELAP DRLAGYNVTA NQIHQALAAA DHSVHAGSFN QANRRYILSA
NNFLTSTREV ERLVVGVHED KPVLLRDVAR IMDGPQEASV YSRISFSRLY RQRQVNTGAH
PQGSNGSFPA VTLAVGKKKG TNAVWVARNV LDRLEELKDS VIPDGVHVEV TRNYGQTAQT
KVNNLLSSLG FAVLTVVVLL AFTLGRREAL IVALAVPISF ALALFVNYLL GYTINRVTLF
ALILSLGLVV DDPITNVDNI QRHIRMGKLP PRSATLAAVQ EVLPPVLIST LAIIVSFTPM
FFITGMMGPY MAPMAANVPL TVIFSTVCAL TIVPWLALTL LRRERLTPDE SGAGQQSSPS
SGTPAWIHSL YRKICSPFLD SRLKRWLLTG AIGLGLAAAV SLPLLRLVPL KMLPFDNKNE
FQLVFDMPEG TPLEATNKAV LAFEDYLRQV PEVTSVVATV GDASPIDFNG MVRHYYLRQA
PHQADIRVNL VDKPDREMQS HGITLRLRND LTKLARRHGV DLKIVEIPPG PPVLATVVAE
IYGSPGTPYA KMLQGAANMT SIMRKEPGVV DIDTSASAAR PRRNFVVDKE KAALHAIPTS
RITQTLRLAM SGTTPATLHA PRERAPLLIR PILPRAHRSE QTALLDLRLR GKGGALVPLG
ELGHFEQVAE DQPIYHKNLK RVVYAQAETA GRSPATAILD MQSRLEHNPL SADLQAEWAG
EGEWKITLRV FRDLGLANIA ALAGIYILLS IQTGSFALPL LILLAVPLTL LGIMPGFWLL
NIFTASPVNG YANPVFFTAT AMIGMITLGG IVIRNAVVLI EFVHESLQQG HDFREAILQS
GAIRLRPIVL TAMTTALGAW PITRDPIFSG LAWALIFGLV ASTVFTLLIV PVTYYALYTS
RYSQESGHE
|
|---|
| |