| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0194 |
|---|
| Symbol | |
|---|
| ID | 8417998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 245456 |
|---|
| End bp | 246412 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645036759 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_003197074 |
|---|
| Protein GI | 258404332 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCAAC TGGAACAATT ACAAGACGCA ATCCGGCACA AACTGCCGGA GTTAGACATG
GTGATCGCCT GGGGCACGGG GTTCGATCCC TTGCATGCCA CCCCGCTTTT CATTCGTGAA
CAGGGCGATC TGGACAAGAT GACCTGGGGG CCGCTGTGCG TGCACAATCT GGCCACCTAT
CTGCCGGGAC TCAAGGGCAA AAAGGTCGGG GTCGTGGTCA AGGGCTGCGA CAGCCGCTCC
ATTGTCCAAT TGCTCGAGGA ATCCTTGATC GAGCGGGAGA ACCTGACTGT TTTCGGACTG
CCCTGCGAGG GCATCGTCGA TCTGGCCAAG GTCGAAGAAG CCCTCGGGCC AGAGGCTGGC
TTTGTTCGCG AGGTCCGCGA GGAAGGTGAC GCTCTGGTGG TGCAGACCGA CTCCGGGGAC
CACCGGCTCT CTATTGCGGA GCTGCGGCCC CAAAAATGCC TCTCCTGCCG CTACCCCAAC
CCGATCATTG CCGACCAGGT CCTTGGCGAG CCGCGGGAGC CGGTAAAGGA TCCGACGGAC
CCGGATCTCG AAGCCCTCGA GGCCATGAGC TACGACGAAC GCATGCAGTA CTGGACAGCC
CAGCTCGATC GCTGCATCCG CTGTTACGCC TGCCGCAACG CCTGCCCCAT GTGCGTCTGC
CGTGACCATT GCATCGCCCA GACCCGGGAC CCGCAATGGA TCAGTCAGGA GACCGGAGTA
GCTGAAAAAT GGCTTTTCCA GATCATCCAC GCCCAGCACT TGGCCGGCCG GTGCACCGAG
TGCGGGGAAT GTGAGCGGGC ATGCCCCATG GATATCCCCA TTTTGACGCT CAAGCGCAAA
ATGAACAGGG AGATCAAAGA GATGTTCGAT TTCGAGGCAG GCACAGACCC CGAAGCCACA
CCGCCGCTGT TCACGTTCCA AGTGGAAGAG GCGAAGATCA ACGAGAGAGG ATGGTAA
|
|---|
| Protein sequence | MSQLEQLQDA IRHKLPELDM VIAWGTGFDP LHATPLFIRE QGDLDKMTWG PLCVHNLATY
LPGLKGKKVG VVVKGCDSRS IVQLLEESLI ERENLTVFGL PCEGIVDLAK VEEALGPEAG
FVREVREEGD ALVVQTDSGD HRLSIAELRP QKCLSCRYPN PIIADQVLGE PREPVKDPTD
PDLEALEAMS YDERMQYWTA QLDRCIRCYA CRNACPMCVC RDHCIAQTRD PQWISQETGV
AEKWLFQIIH AQHLAGRCTE CGECERACPM DIPILTLKRK MNREIKEMFD FEAGTDPEAT
PPLFTFQVEE AKINERGW
|
|---|
| |