| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0190 |
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| Symbol | |
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| ID | 8417994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 241983 |
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| End bp | 242927 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645036755 |
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| Product | Patatin |
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| Protein accession | YP_003197070 |
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| Protein GI | 258404328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCG AGGCCTTGCG CCAAAAAAAG ATCGGCATAG CCCTGAGTTG CGGAGCCGCA
CGAGGGTTCG CCCATCTGGG CGTTTTGGAC GAGTTGGATA GGGCCGGTAT CCACCCCTGC
TGCATTGCCG GTAGCAGCGC CGGAGCTTTG GTGGGGGCGT TATATAGCGG CGGACGTTTT
CAGGATTATA TCGAGCGTAT TCAGCATTGG ACCCGAAAGG ATACGCTGGC CATGATGGAT
CCGGTAGTGC CGCGGTCAGG TCTGATCAAT GGCGACCGGA TTCTGGAATT CAACAGTTCC
TTTTTTACCG TCGAGAAGAT TGAGGCGTGC GCTCCTGCTT TAGCAGTCGT GGCCACCGAA
GCTCTGACGG GCAAGGAGTT GGTCTTGCAG CAGGGAGATT TGCGCTCCGC CATTCGGGGC
AGTATTTCTA TCCCAGGCCT GTTCACACCG GCTCCCTGGG AGGGGACCTT CCTTTTGGAC
GGTGGGCTGG TCAATCCGTT ACCCGTCAAT GTCTGCCGTG ATCTCGGGGC TGAAATCATT
ATTGCCGTGG ATGTCAATTC ACAAATGGTC CTGCCCTTGG AGACCAGGGA AAATGAAACA
GCCGAACATG AGGAGGCCGT GCCGGAAATC CCTTCAACCT GGCATAAGGT CCTGGGGTCA
AGTCAGACGT ATCTGTTTCA GTTGGTGCAG AACTGGTTGG GCAACACCAA CTCTCAGCGG
AAAAAAACGG CCTTTGAAAA AGGCATTGTC GACACCATGC TGCATTCGAT CACGATTATG
CAGCGAGCGG TCCAGCAAGC CCATCTGCAG ACGACACGTC CGGAATTTTT GCTCCAGCCG
CAGATAAATG GCGTTCGGCT CATGGATTTC CATCACGCCG CCTCGACTAT CGAGGCCGGA
CGTCAGGCTG TGCAGGATTT TCTCAACAAT CTGGATTCCC TGTAA
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| Protein sequence | MHIEALRQKK IGIALSCGAA RGFAHLGVLD ELDRAGIHPC CIAGSSAGAL VGALYSGGRF
QDYIERIQHW TRKDTLAMMD PVVPRSGLIN GDRILEFNSS FFTVEKIEAC APALAVVATE
ALTGKELVLQ QGDLRSAIRG SISIPGLFTP APWEGTFLLD GGLVNPLPVN VCRDLGAEII
IAVDVNSQMV LPLETRENET AEHEEAVPEI PSTWHKVLGS SQTYLFQLVQ NWLGNTNSQR
KKTAFEKGIV DTMLHSITIM QRAVQQAHLQ TTRPEFLLQP QINGVRLMDF HHAASTIEAG
RQAVQDFLNN LDSL
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