| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0187 |
|---|
| Symbol | |
|---|
| ID | 8417991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 239360 |
|---|
| End bp | 240661 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645036752 |
|---|
| Product | HI0933 family protein |
|---|
| Protein accession | YP_003197067 |
|---|
| Protein GI | 258404325 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAA AACGTGAACC CGGTGACCGG AGAGCGAATC CCCGGGTTAT AGTGATCGGG
GGCGGCCCAG CCGGCTTACT TGCCGCCGGA TATGCCGCGC GGCAGGGAGC AGAGGTTGTC
CTCCTGGAAA AGATGCACAA GCCGGGACTC AAATTGGGAA TAACCGGCAA AGGCCGATGC
AATGTGACCA ATGCCGCCCC GTTGCGTGAA TTTCTGGCGC ATTTCGGCAC CCAGGGGCGG
TTTTTGCGCC AAGCCCTGAA CCGGTTTTCG CCTCAGGATT TGCAAGAGCT GTTTGCCTCT
ATCGGCATCG CCACGGTGGT CGAGCGTGGC GGCCGGGTCT TCCCCGAACA CCTGCGGGCA
CCTGCTGTAG CTTCGCGGCT TACGGAGTGG GTTAAGAAAG GGGGGGTGAG GGTGCAGACA
CACACTGAGG TGCTCGGTGT AACGGCGACT CGTGACCGGG TGACGGGTGT CCGGATTCGC
GGGGAGCAGG GGGAATCCGT GTGGCCGTGT CATGCCCTTA TCGTGGCCAC CGGAGGAGCC
TCCTATCCGC AGACCGGATC GACGGGGGAG GGGGCCTCCT GGATGACCGC CTTGGGCCAC
ACGGTGGTGC CGTGTCGTCC CGCCTTGGTG CCGTTGGAGA CCGCGGGGGA CACGGCCGCC
CGATTGCAGG GATTGAGCCT GCGCAATGTC GAGGTCAGTC TGTGGTTAAG GGGCAAGAAA
ACGGCCCAGG CTTTCGGGGA GATGGTCTTC ACCCATTTCG GGGTCTCGGG TCCGGTGGTG
CTGGAACTGA GCCAGCAGGC CGTGGATCTG TTGCGAAACG GAGAGTGCCC GGAACTTTGC
ATTGACCTCA AACCGGCACT CGACGAGACA AAATTGGACG CCCGTTTGCT CCGCGATATC
CAGCACAAAG GAAAAAAGCA GATTGCCAAT TGGTTGCGCG ATCTGTTGCC GACCAGCCTG
ATCCCCATCT GTCTTGAAGC CACTGGCCTG GATGGCAGTC TCCAGGCCGG GCAGATGACC
GCTCGTCAGC GGCGGAATCT GAAAATGTGG CTCAAGTATT TTCCTTTGCC CCTGACCGGG
TATCGCGGCT TTGAGGAAGC GATTGTCACC GCCGGTGGGG TGGCTCTTCA AGAAGTTGAT
CCGCGCACGA TGCAGTCCAA GCTGGTTCCT GGATTGTACC TGGCCGGAGA AATCCTTGAT
CTGGCCGCTG ACACCGGCGG GTACAATCTT CAGGCAGCTT TTTCCACCGG CGTGGTCGCC
GGCGAAGCAG CCGGGATCGC TGTGAGCAGG TCAACCGGAT AG
|
|---|
| Protein sequence | MKGKREPGDR RANPRVIVIG GGPAGLLAAG YAARQGAEVV LLEKMHKPGL KLGITGKGRC
NVTNAAPLRE FLAHFGTQGR FLRQALNRFS PQDLQELFAS IGIATVVERG GRVFPEHLRA
PAVASRLTEW VKKGGVRVQT HTEVLGVTAT RDRVTGVRIR GEQGESVWPC HALIVATGGA
SYPQTGSTGE GASWMTALGH TVVPCRPALV PLETAGDTAA RLQGLSLRNV EVSLWLRGKK
TAQAFGEMVF THFGVSGPVV LELSQQAVDL LRNGECPELC IDLKPALDET KLDARLLRDI
QHKGKKQIAN WLRDLLPTSL IPICLEATGL DGSLQAGQMT ARQRRNLKMW LKYFPLPLTG
YRGFEEAIVT AGGVALQEVD PRTMQSKLVP GLYLAGEILD LAADTGGYNL QAAFSTGVVA
GEAAGIAVSR STG
|
|---|
| |