| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0184 |
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| Symbol | |
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| ID | 8417988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 233826 |
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| End bp | 235493 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036749 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_003197064 |
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| Protein GI | 258404322 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.37523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCC CGCCGACTGC GCCCGCATCA ACTGAGACAA CTGCATCAGC TCTGGGCAGC
GACGACCGGC ACCGACTTGT TCTGGCCGCC GGCATCGTTC GTCTTGTCTG CCTCGGACTT
TTGCTCATTC CCCAGGCCCT TATCTGGGGC GGAGACACCA CGCCGGAGTT CATGTTCCGC
TACGGCGGCG AGGTGCTCTA TACGGTGGCG CTGGTTGCCG GTTTTCTGCT CAATATTGTG
TTTTTGCTCT CGTGGAAACG GTTCGTTTCC ACGAGTTGGC TGGTCGGCAC GCAATTGGGA
ACGGATATTG TTCTGGCCCT TGTCCTTGTC GTCTTAACCG GTGGCGTTTC GAGTCCGTTT
ACCTTCCTCT TCTGGGGCAT CGTTTTTTTT CATGGGCGTG TGCTCGGGCG ACGGCCTTCA
CTGGCCATAG GCGTCGGCGT GGCCGTGCTC ATGGGAGGAC TCGGTGCGGT TCAGGTCGTC
TGGCCGGAGA TTTGGCATCT GCAAGGGGCC CCGGGACAGT TGGGGTATTA TCTGTCGCTG
CAATGGGTCG GATTGGGGCT TGTCATTCTC CTGGTGCGTT CAAGCCGGAG CGAAACGGAG
AAACTTTTTG CCCGTTTGCG GCGGCAGGAA CAGGCCCTGG AAGAGGCCGA AGCCCTGAAA
GCCAAAGTTC TGGACTGGAT GGATAGCGGG CTCATGGTTC TCAATACGCG TGGCGAGGTC
ACCTCGGCCA ACAGACAGGC TCTGCTTATG GCCGGCGAAC ACCGATTGGA TAGCGTTCTT
GGCCGTCCCC TTCGCGATGT GTTTCCGGCC TTTGATCCTT ATTGGCAAAA ATGGCGCCAT
GACGGCCGCC GGGAACGTGA CGAAGTGCAG GACCCCGACC AGCGTGTTTA CGGGGTGCGG
ATGCTTTTAG CCCCGGATCA GCAGAGCACG CTGGTATTGT TCGCGGATAT CACCGAGATC
CGCCGCCTGG AGCAACGGGT CCGGGAGATG GAAAAAATGG CCACCATAGG CGAATTGGCT
GCTGGTTTGG CCCATGAAAT GAAAAATCCC TTGGCGGGAA TCAAAGCCGG ACTGCAACTC
GCCGAACAAG GGGATGTCCC GCCCGAGCAG TTGCACCGCC TCCATGGTGT TGTGCAGCGC
GATATCGGCC GACTTGATGT GTTGCTTCGG GATTTTTTGA ATTACGCGCG TCCCAATCCG
CCTCAGCCAG AAAGCGTGGA AATCGAGGAC GTCGTCGAGG ATGTTTTGAG CGTGTGCCGG
TATGAATTCC CTGGCGTTGA TTTTGCGGTT GCACGGGGGG TGGGCCGGGA GACGTGGTGG
GCGGATCGGC ACCATCTGCA CCAGGTCCTT TTGAATCTGG TGCGCAACGC AGCCGAGTCT
GTGGCCAGCC AGGGGCACGG CCTGGTCCGG GTCGAGCAGC TAGCTGATGA AGAGGGCAGG
GGGCTCGCCG TCGTGGATTC CGGCTCCGGG ATCCTGCCAG GGCAGGAGCG GAAAATTTTT
GACCCCTTTG TGACCACCAA AGAGCAGGGC TCCGGTCTGG GACTGTCTAT TGCCCAGCGG
TTGGCCCATC AGAATCGGTG CTGGATTGAA TTGCGCAATG CGGCCGGCGG TGGGGGAGAG
GCGCGTCTTG TGTATGAGTC AACGATCCCC GTATTTGGAG AGCGATGA
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| Protein sequence | MATPPTAPAS TETTASALGS DDRHRLVLAA GIVRLVCLGL LLIPQALIWG GDTTPEFMFR
YGGEVLYTVA LVAGFLLNIV FLLSWKRFVS TSWLVGTQLG TDIVLALVLV VLTGGVSSPF
TFLFWGIVFF HGRVLGRRPS LAIGVGVAVL MGGLGAVQVV WPEIWHLQGA PGQLGYYLSL
QWVGLGLVIL LVRSSRSETE KLFARLRRQE QALEEAEALK AKVLDWMDSG LMVLNTRGEV
TSANRQALLM AGEHRLDSVL GRPLRDVFPA FDPYWQKWRH DGRRERDEVQ DPDQRVYGVR
MLLAPDQQST LVLFADITEI RRLEQRVREM EKMATIGELA AGLAHEMKNP LAGIKAGLQL
AEQGDVPPEQ LHRLHGVVQR DIGRLDVLLR DFLNYARPNP PQPESVEIED VVEDVLSVCR
YEFPGVDFAV ARGVGRETWW ADRHHLHQVL LNLVRNAAES VASQGHGLVR VEQLADEEGR
GLAVVDSGSG ILPGQERKIF DPFVTTKEQG SGLGLSIAQR LAHQNRCWIE LRNAAGGGGE
ARLVYESTIP VFGER
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