| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0179 |
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| Symbol | |
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| ID | 8417983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 227364 |
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| End bp | 228458 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645036744 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003197059 |
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| Protein GI | 258404317 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0100071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCT ATATCCTGCG CCGCCTCTTT CTGATGGTCC CCACCCTGCT GGGCATCCTG
ACCATCAATT TCTTTCTCAT CCAGGCCGCT CCCGGCGGTC CAGTGGAACA ATTTATGGCC
AAGCTCCATG GCCAGGCCGG ACGGTCCGTG GAACGCTTCG CTGGCAGCGA ATCCGGGGAT
TTCCAGACCC AAACCCCAAA CGGCGAGAAC GATATCTCCT ACAGGGGCGC TCAGGGCCTG
GACCCGGAAC TTGTGCAAAA GATCGAAAAA CTCTACGGGT TCGACAAGCC CATGTGGCAG
CGGTATATCC ACATGCTGGG CAACTATCTG CGCTTCGACC TCGGGGACTC CTTTTTCCGC
GAACGATCGG TCATGGGACT CATCCTCTCC AAACTCCCGG TTTCCGTGTC CCTCGGATTT
TGGAGCACCC TGATCATTTA CGCTGTCTCC ATTCCCTTGG GCATTCGCAA AGCGCTGCAC
CACGGCTCGC GCTTTGACGT CTGGAGCAGT ACGGCCATCA TTGTCGGAAA CGCTATCCCA
GTCTTTTTAT TTGCCATTTT ACTTATTGTT CTTTTCGCTG GCGGCTCGTA CTGGGATATC
TTTCCCTTGC GGGGGCTGAC CTCACCCGAC TTTGCGGATC TCTCGCTGTG GGCAAAAATC
AAGGATTATT TCTGGCATTT GACACTGCCG GTTCTCTCCA TGGTCATTGG CGGCTTCGCG
ACCCTGACCC TGTTGACGAA GAACTCCTTT CTCGACGAGA TCGGCAAGCA GTATGTGGTC
ACTGCCCGGG CCAAAGGGCT GACCGAAAAA CGGATTCTTT ATGGCCATGT CTTTCGCAAC
GCGATGCTGA TCATCATCGC CGGATTTCCA GCCGCCTTTA TCAGCATGTT TTTTACCGGC
TCCCTGCTCA TTGAGGTCAT TTTTTCTCTG GACGGGCTGG GGCTGCTGGG CTTTGAATCC
ACGTTGCAAC GCGATTATCC GGTCATGTTC GGCACCCTCT ATATTTTCAC TCTTATCGGC
CTGCTGGCCA AACTCGCCAG CGACCTGACC TACACCCTTG TCGACCCCCG CATTGACTTT
GAACGCCGGG ATTGA
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| Protein sequence | MGSYILRRLF LMVPTLLGIL TINFFLIQAA PGGPVEQFMA KLHGQAGRSV ERFAGSESGD
FQTQTPNGEN DISYRGAQGL DPELVQKIEK LYGFDKPMWQ RYIHMLGNYL RFDLGDSFFR
ERSVMGLILS KLPVSVSLGF WSTLIIYAVS IPLGIRKALH HGSRFDVWSS TAIIVGNAIP
VFLFAILLIV LFAGGSYWDI FPLRGLTSPD FADLSLWAKI KDYFWHLTLP VLSMVIGGFA
TLTLLTKNSF LDEIGKQYVV TARAKGLTEK RILYGHVFRN AMLIIIAGFP AAFISMFFTG
SLLIEVIFSL DGLGLLGFES TLQRDYPVMF GTLYIFTLIG LLAKLASDLT YTLVDPRIDF
ERRD
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