| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0167 |
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| Symbol | |
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| ID | 8417971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 209672 |
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| End bp | 211345 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645036732 |
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| Product | cytochrome c family protein |
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| Protein accession | YP_003197047 |
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| Protein GI | 258404305 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.333474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.1597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTCA ACCGACCAGC ACCACTGCGC GTGGCGTGGC TTGGCCTGGC AGTCCTGCTC
CTCTGGAGCA CCACGGGGCT GGCCGCTGTG GAGGACCAGC AGCAAAGCGT GGACAAAGAC
TACGGCGCGG CCGAAGCCCG CAAAGTCGTC GAAGCGCCCA AGCGATGGAT CACCGCTGAC
CACTCAAAGC ACAAAATCCT GCAAAAAGAT TTCGAATCAG GCCCCGAAGT CACAGAGGCG
TGTCTGACCT GTCACAACGA GGCCGCTCTC CAGTTCCACG AAACCATCCA CTGGACCTGG
ATTTGCCCGG CCGATCCCAA TAAGGAGATG GGCAAGAACG GCGTCAGTAT GAACAACTTC
TGAATGTCCA TCAAAAGCAA CGAGGCTCGT TGCACATCCT GTCACGCCGG GTACGGCTGG
GAAGACAAGA ATTTTGATTT CACCTCGGAA AAAAATGTCG ACTGTCTCGT CTGCCACGAA
CAGACCGGGA CCTATAAAAA ATTCCCCACC GGGGCTGGCC ATCCAGTCTC GGAGCCCAAA
AAGTTCGGGG GCAAAATGTT CTATCCGCCG AACTGGAACA AGGTCGCCCA GAGCGTGGGG
CGGCCGGACC GTAAAAACTG CGGCACCTGC CACTTCTACG GCGGGGGCGG CGACGGCGTG
AAGCATGGCG ACCTGGACAG TTCCCTGTAC AATCCCTCCC AGCAACTCGA CGTCCACATG
AGCGAAGAGG GCGGGGATTT TACTTGTGTT CGTTGCCACA CCACGGAAGC CCACTCCATT
GCCGGCCGGT GCTATAAAAA GCCCGCCTAC GAAGAACGCA AAAGCCTTAT CGATGACGAC
CAGATCAAAC GCATCTCCTG CGTCTCCTGC CACACGACCA CGCCCCACAA GCCGGGGCAC
AAGGCCAACG ACCACACGGA CATGGTTGCC TGCCAATCTT GCCATATCCC GGAATTTGCC
CGGGTCAACC CGACCAAGAT GTGGTGGGAC TGGTCCAAGG CCGGTCGCCT CAACGAAAAA
GGCAAACCGA TCCTCACCGA GGGCAAATAC GGCAAGCACT CCTACCACGG CAAGAAAGGG
GAGTTTCGCT GGGAAAAGAA TGTGGTTCCG GAATACGACT GGTTCAACGG CTCCCTGGAA
TACCAGTTGT TCACCGAAAA ATTCGATCCG GCCAATGCGC CCATTGAATT GAACAAAGTC
CAGGGATCTC GTGAAGATCC CAGGGCTCTG ATCTACCCCT TCAAGATCCA CCGCGCTAAA
CAGCCCTATG ACACCAAACT GAACAAGTTC GTCAATGTCC ACCTTTTCGG CAAAGACAAA
AACGCCTACT GGAAATCCTA TGATTGGCAG CGGGCCATTA CGGCGGGCAT GGACTACATG
GGATTGCCCT ACAGCGGGGA ATTCGATTTC ATTGAAACCG AATACCACTT CCCCATCACC
CACATGGTCG CCCCTAAGGA AGACTCCTTG GCTTGCAACC AATGCCACGC GGACAACGCT
CGCTTGGCCC AGCTGACCGG CTTCTACATG CCCGGACGCG ATAAAAATGT CCTCGTTGAC
ACCATCGGCT GGTTAGCCGT GATCGGCTCG CTGGGCGGGG TTGGCATCCA TGCGGCGTTG
CGGCGCAGAT TCGCCAAGAA ACGCCAAACC AACGGAGGAG CCGGGCATGA ATAA
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| Protein sequence | MHFNRPAPLR VAWLGLAVLL LWSTTGLAAV EDQQQSVDKD YGAAEARKVV EAPKRWITAD
HSKHKILQKD FESGPEVTEA CLTCHNEAAL QFHETIHWTW ICPADPNKEM GKNGVSMNNF
UMSIKSNEAR CTSCHAGYGW EDKNFDFTSE KNVDCLVCHE QTGTYKKFPT GAGHPVSEPK
KFGGKMFYPP NWNKVAQSVG RPDRKNCGTC HFYGGGGDGV KHGDLDSSLY NPSQQLDVHM
SEEGGDFTCV RCHTTEAHSI AGRCYKKPAY EERKSLIDDD QIKRISCVSC HTTTPHKPGH
KANDHTDMVA CQSCHIPEFA RVNPTKMWWD WSKAGRLNEK GKPILTEGKY GKHSYHGKKG
EFRWEKNVVP EYDWFNGSLE YQLFTEKFDP ANAPIELNKV QGSREDPRAL IYPFKIHRAK
QPYDTKLNKF VNVHLFGKDK NAYWKSYDWQ RAITAGMDYM GLPYSGEFDF IETEYHFPIT
HMVAPKEDSL ACNQCHADNA RLAQLTGFYM PGRDKNVLVD TIGWLAVIGS LGGVGIHAAL
RRRFAKKRQT NGGAGHE
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