| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0163 |
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| Symbol | |
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| ID | 8417967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 205967 |
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| End bp | 207106 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036728 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003197043 |
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| Protein GI | 258404301 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0101171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.219232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGA GGTTTGCCCG GAAGGTCGGG TTGCTCGGTA TGGTGGTTGG GTTGCTGATG
GCGACGGTGA CGGCCTCTGC GGCTGCGTCA CCCAGCCTAG AGGCTATGGT CGGCCAAATG
CTCATGATCG GCTTTCGAGG CACGACTTTT GAGGCCAAAA GTCCCCTCGG CGAGGCGATT
ACAGAGGGCA ATCTGGGCGG TGTGGTCCTT TATGGCCGAG ATGTGGCCCT GAACAAACCG
ATGCGCAATA TCCGCTCCGC CGCCCAACTG CAGGCGTTGA CCGCTGACCT TCAGGACCAC
GCCCGGATTC CGCTTTTCAT TGCCGTTGAT GAGGAGGGCG GTCAGGTCAG CCGCCTCGCC
CCTCGGTTTG GCTTTCCCGA GACTGTCACG GCGGCGACGT GGGGCCGACG CAACGATCCA
GCCTGGACCA GGCGCGGGGC CAGGGCTATC GGGCAGCGGC TCCGGAACCT TGGGTGCACC
ATAAATCTCG CGCCGGTGGT TGATCTGAAC ACGAACCCCG ACAATCCGGC TATCGGCAAG
CTGGAACGGA GTTTCGGGGC CAATCCGGAC ACCGTCACGC GCCAGGCGGC TGCGTTTATC
CACGGGCTGC ACGACGCCGG CATTCTGGCC TGCATCAAGC ATTTTCCAGG TCACGGCAGC
GCGTATAACG ATTCCCATCT GGGGTTGACC GATATCAGCA CGACCTGGTC GCCCAAGGAA
TTGGAACCCT ATAAACGGCT CGTCGACCGG GGACTGGCAG ACGCTGTGAT GACCGCCCAT
GTCTTTCATG CCGGATTGGA TCCGAAGGTG CCGGCGACGT TGTCGGCCGA GATCATTCCC
GATATTCTGC GCCGGGAGAT CGGGTATGAG GGGGTGGTGA TCAGCGACGA TCTGCAGATG
GGGGCTATTC GCCAGTCATT TTCGCTGCGG CAGACGGTGC GCCGGTGTCT GGAAGCGGAT
GTGGATATTT TCCTGTTCGG CAATAACCTG GAGTATGAGC CGTTTGTCTG GCGCCGTGTC
CAGCGGATCG TGCGGGACCT TGTCGATCAG AACATTGTCT CTCGCTCCCG CATCGAGCGC
TCCTACGAAC GAATCCAAAG GCTTAAAGAG CGGATGGACC TGTTTCAAGG GAGATCGTGA
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| Protein sequence | MGKRFARKVG LLGMVVGLLM ATVTASAAAS PSLEAMVGQM LMIGFRGTTF EAKSPLGEAI
TEGNLGGVVL YGRDVALNKP MRNIRSAAQL QALTADLQDH ARIPLFIAVD EEGGQVSRLA
PRFGFPETVT AATWGRRNDP AWTRRGARAI GQRLRNLGCT INLAPVVDLN TNPDNPAIGK
LERSFGANPD TVTRQAAAFI HGLHDAGILA CIKHFPGHGS AYNDSHLGLT DISTTWSPKE
LEPYKRLVDR GLADAVMTAH VFHAGLDPKV PATLSAEIIP DILRREIGYE GVVISDDLQM
GAIRQSFSLR QTVRRCLEAD VDIFLFGNNL EYEPFVWRRV QRIVRDLVDQ NIVSRSRIER
SYERIQRLKE RMDLFQGRS
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