Gene Dret_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0158 
Symbol 
ID8417962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp201464 
End bp202261 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID645036723 
Productprotein of unknown function DUF81 
Protein accessionYP_003197038 
Protein GI258404296 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.220431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACTG CTTTTGTGAT GTATATTGCT CTGGGTGCCT TTGCCGGGGT GCTGGCCGGT 
CTCCTGGGGA TCGGCGGCGG GCTCGTCATT GTGCCCATGC TGACGTTCAT GTTCACGGCG
CAGGGATTGC CCGATGCCTA TATCCTGCAC TTGGCCCTGG GGACGTCGCT GGCGACCATC
CTGTTCACCT CCATCTCCAG TCTGCGGGCC CACAACCAGC ATGGAGCGGT GAAGTGGCCA
GTCTTCTGGC GCATCGCGCC GGGGATCATC TTTGGCACCT TTCTGGGGTC CTGGATCGCC
GCGCAATTGT CCACGGACTT TCTCAAAGGA TTTTTCGCCT GCTTTCTGTT TTATGTCGGC
ATTCGCATGC TGCGCGGCAG CAAACCCAAG CCGTCCCGGC AATTGCCCGG AACGCTCGGG
ATCTTCGGGG CCGGTAGCGG GATCGGGGTT TTTTCCAGCT TAGTCGGCAT CGGCGGCGGG
ACGCTCTCGG TGCCTTTTCT TGTCTGGTGC AACGTGACCA TGCATAAGGC TATCGGGACT
GCGGCCGCCA TCGGTTTTCC TATTGCCGTG GCCGGCAGTC TGGGATACCT GGTCAACGGC
CTCGGCACAG AGGTTCTGCC CTGGTATTGT CTGGGGTTTA TCCATATCCC AGCCCTTTTG
GGCATTATTC TGGCCAGCGT TTTGACCGCG CCGGTGGGGG CGCGGTTGGC GCATAAACTG
CCGGTGGCGC GGCTGAAAAA GATCTTTGCT GTGCTGCTGC TCTTTGTCGG ATTGCGCATG
CTCTGGACCC TGTTCTGA
 
Protein sequence
MITAFVMYIA LGAFAGVLAG LLGIGGGLVI VPMLTFMFTA QGLPDAYILH LALGTSLATI 
LFTSISSLRA HNQHGAVKWP VFWRIAPGII FGTFLGSWIA AQLSTDFLKG FFACFLFYVG
IRMLRGSKPK PSRQLPGTLG IFGAGSGIGV FSSLVGIGGG TLSVPFLVWC NVTMHKAIGT
AAAIGFPIAV AGSLGYLVNG LGTEVLPWYC LGFIHIPALL GIILASVLTA PVGARLAHKL
PVARLKKIFA VLLLFVGLRM LWTLF